Analysis of interatomic Contacts of Structural Units in PDB entry:
8SUE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SUE entry

There are 2 chains in PDB entry 8SUE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 1LYS 539
B
 CYS 1LYS 539
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 8SUE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed alpha
Helix 2
AA2
A
97 108Right-handed alpha
Helix 3
AA3
A
109 114Right-handed alpha
Helix 4
AA4
A
159 163Right-handed 310
Helix 5
AA5
A
229 246Right-handed alpha
Helix 6
AA6
A
259 276Right-handed alpha
Helix 7
AA7
A
292 306Right-handed alpha
Helix 8
AA8
A
315 331Right-handed alpha
Helix 9
AA9
A
340 355Right-handed alpha
Helix 10
AB1
A
374 379Right-handed 310
Helix 11
AB2
A
381 395Right-handed alpha
Helix 12
AB3
A
400 410Right-handed alpha
Helix 13
AB4
A
417 420Right-handed 310
Helix 14
AB5
A
421 430Right-handed alpha
Helix 15
AB6
A
432 437Right-handed alpha
Helix 16
AB7
A
444 451Right-handed alpha
Helix 17
AB8
A
458 463Right-handed alpha
Helix 18
AB9
A
480 492Right-handed alpha
Helix 19
AC1
A
493 498Right-handed alpha
Helix 20
AC2
A
499 504Right-handed alpha
Helix 21
AC3
A
511 525Right-handed alpha
Helix 22
AC4
B
19 23Right-handed 310
Helix 23
AC5
B
79 87Right-handed alpha
Helix 24
AC6
B
97 108Right-handed alpha
Helix 25
AC7
B
108 114Right-handed alpha
Helix 26
AC8
B
159 163Right-handed 310
Helix 27
AC9
B
227 246Right-handed alpha
Helix 28
AD1
B
259 276Right-handed alpha
Helix 29
AD2
B
292 306Right-handed alpha
Helix 30
AD3
B
315 322Right-handed alpha
Helix 31
AD4
B
322 331Right-handed alpha
Helix 32
AD5
B
340 355Right-handed alpha
Helix 33
AD6
B
373 377Right-handed 310
Helix 34
AD7
B
381 395Right-handed alpha
Helix 35
AD8
B
400 410Right-handed alpha
Helix 36
AD9
B
421 430Right-handed alpha
Helix 37
AE1
B
432 437Right-handed alpha
Helix 38
AE2
B
444 451Right-handed alpha
Helix 39
AE3
B
458 463Right-handed alpha
Helix 40
AE4
B
480 492Right-handed alpha
Helix 41
AE5
B
494 499Right-handed alpha
Helix 42
AE6
B
511 525Right-handed alpha
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There are 8 sheets in PDB entry 8SUE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 178first strand
Strand 2
A
145 149anti-parallel
Strand 3
A
153 157anti-parallel
Strand 4
A
2 7anti-parallel
Strand 5
A
43 47anti-parallel
Strand 6
A
32 35anti-parallel
Strand 7
B
30 36anti-parallel
Strand 8
B
39 48anti-parallel
Strand 9
B
2 7anti-parallel
Strand 10
B
154 157anti-parallel
Strand 11
B
145 148anti-parallel
Strand 12
B
176 178anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 76first strand
Strand 2
A
119 126anti-parallel
Strand 3
A
131 133anti-parallel
Strand 4
A
186 189anti-parallel
Strand 5
A
195 197anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 184first strand
Strand 2
A
201 202anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 288first strand
Strand 2
A
308 313parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 361first strand
Strand 2
A
414 416parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 73first strand
Strand 2
B
122 126anti-parallel
Strand 3
B
131 135anti-parallel
Strand 4
B
184 188anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 77first strand
Strand 2
B
118 119anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
308 313first strand
Strand 2
B
283 288parallel
Strand 3
B
252 255parallel
Strand 4
B
359 361parallel
Strand 5
B
414 416parallel
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