Analysis of interatomic Contacts of Structural Units in PDB entry:
8SUF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SUF entry

There are 8 chains in PDB entry 8SUF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 27	PRO 983
B	GLU 27	PRO 983
C	GLU 27	PRO 983
D	GLU 27	PRO 983
E	ALA 29	PRO 136
F	ALA 29	PRO 136
G	ALA 29	VAL 135
H	ALA 29	CYS 133

There are 64 helices in PDB entry 8SUF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	59	64	Right-handed alpha
Helix 2	AA2	A	110	115	Right-handed 310
Helix 3	AA3	A	164	169	Right-handed alpha
Helix 4	AA4	A	209	214	Right-handed alpha
Helix 5	AA5	A	275	280	Right-handed alpha
Helix 6	AA6	A	324	328	Right-handed 310
Helix 7	AA7	A	417	422	Right-handed 310
Helix 8	AA8	A	628	632	Right-handed 310
Helix 9	AA9	A	655	660	Right-handed 310
Helix 10	AB1	A	754	758	Right-handed 310
Helix 11	AB2	A	917	926	Right-handed alpha
Helix 12	AB3	A	931	934	Right-handed 310
Helix 13	AB4	A	940	947	Right-handed alpha
Helix 14	AB5	A	969	975	Right-handed alpha
Helix 15	AB6	B	59	64	Right-handed 310
Helix 16	AB7	B	112	117	Right-handed 310
Helix 17	AB8	B	164	169	Right-handed alpha
Helix 18	AB9	B	209	214	Right-handed alpha
Helix 19	AC1	B	275	280	Right-handed alpha
Helix 20	AC2	B	321	326	Right-handed alpha
Helix 21	AC3	B	417	421	Right-handed 310
Helix 22	AC4	B	535	539	Right-handed 310
Helix 23	AC5	B	628	632	Right-handed 310
Helix 24	AC6	B	653	661	Right-handed 310
Helix 25	AC7	B	708	713	Right-handed 310
Helix 26	AC8	B	754	758	Right-handed 310
Helix 27	AC9	B	849	855	Right-handed alpha
Helix 28	AD1	B	917	926	Right-handed alpha
Helix 29	AD2	B	931	934	Right-handed 310
Helix 30	AD3	B	941	948	Right-handed alpha
Helix 31	AD4	B	969	975	Right-handed alpha
Helix 32	AD5	C	67	71	Right-handed 310
Helix 33	AD6	C	209	214	Right-handed alpha
Helix 34	AD7	C	275	280	Right-handed alpha
Helix 35	AD8	C	417	422	Right-handed 310
Helix 36	AD9	C	442	446	Right-handed 310
Helix 37	AE1	C	653	661	Right-handed 310
Helix 38	AE2	C	692	696	Right-handed 310
Helix 39	AE3	C	754	758	Right-handed 310
Helix 40	AE4	C	849	855	Right-handed alpha
Helix 41	AE5	C	917	926	Right-handed alpha
Helix 42	AE6	C	931	934	Right-handed 310
Helix 43	AE7	C	941	947	Right-handed alpha
Helix 44	AE8	C	969	975	Right-handed alpha
Helix 45	AE9	D	67	69	Right-handed 310
Helix 46	AF1	D	164	169	Right-handed alpha
Helix 47	AF2	D	209	214	Right-handed alpha
Helix 48	AF3	D	275	280	Right-handed alpha
Helix 49	AF4	D	324	328	Right-handed 310
Helix 50	AF5	D	417	422	Right-handed 310
Helix 51	AF6	D	535	539	Right-handed 310
Helix 52	AF7	D	628	632	Right-handed 310
Helix 53	AF8	D	656	660	Right-handed 310
Helix 54	AF9	D	692	696	Right-handed 310
Helix 55	AG1	D	754	758	Right-handed 310
Helix 56	AG2	D	849	855	Right-handed alpha
Helix 57	AG3	D	917	926	Right-handed alpha
Helix 58	AG4	D	931	934	Right-handed 310
Helix 59	AG5	D	942	947	Right-handed alpha
Helix 60	AG6	D	969	975	Right-handed alpha
Helix 61	AG7	E	91	101	Right-handed alpha
Helix 62	AG8	F	91	101	Right-handed alpha
Helix 63	AG9	G	90	101	Right-handed alpha
Helix 64	AH1	H	90	101	Right-handed alpha

There are 52 sheets in PDB entry 8SUF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7,

There are 18 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	35	first strand
Strand 2	A	45	49	anti-parallel
Strand 3	A	73	77	parallel
Strand 4	A	98	102	parallel
Strand 5	A	122	126	parallel
Strand 6	A	150	154	parallel
Strand 7	A	174	176	parallel
Strand 8	A	198	200	parallel
Strand 9	A	221	223	parallel
Strand 10	A	243	245	parallel
Strand 11	A	263	265	parallel
Strand 12	A	286	288	parallel
Strand 13	A	309	311	parallel
Strand 14	A	334	336	parallel
Strand 15	A	358	360	parallel
Strand 16	A	382	384	parallel
Strand 17	A	405	407	parallel
Strand 18	A	428	430	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	136	first strand
Strand 2	A	159	160	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	369	first strand
Strand 2	A	392	393	parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	476	478	parallel
Strand 3	A	500	502	parallel
Strand 4	A	523	525	parallel
Strand 5	A	545	547	parallel
Strand 6	A	570	572	parallel
Strand 7	A	592	594	parallel
Strand 8	A	616	618	parallel
Strand 9	A	642	644	parallel
Strand 10	A	668	669	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	650	651	first strand
Strand 2	A	676	678	parallel
Strand 3	A	685	687	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	704	first strand
Strand 2	A	719	721	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	726	730	first strand
Strand 2	A	737	741	anti-parallel
Strand 3	A	764	767	parallel
Strand 4	A	788	790	parallel
Strand 5	A	812	814	parallel
Strand 6	A	836	838	parallel
Strand 7	A	860	862	parallel
Strand 8	A	882	884	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	774	775	first strand
Strand 2	A	798	799	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	780	781	first strand
Strand 2	A	804	805	parallel
Strand 3	A	828	829	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	936	937	first strand
Strand 2	A	967	968	anti-parallel

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There are 18 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	35	first strand
Strand 2	B	45	49	anti-parallel
Strand 3	B	73	77	parallel
Strand 4	B	98	102	parallel
Strand 5	B	122	126	parallel
Strand 6	B	150	154	parallel
Strand 7	B	174	176	parallel
Strand 8	B	198	200	parallel
Strand 9	B	221	223	parallel
Strand 10	B	243	245	parallel
Strand 11	B	263	265	parallel
Strand 12	B	286	288	parallel
Strand 13	B	309	311	parallel
Strand 14	B	334	336	parallel
Strand 15	B	358	360	parallel
Strand 16	B	382	384	parallel
Strand 17	B	405	407	parallel
Strand 18	B	429	430	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	136	first strand
Strand 2	B	159	160	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	369	first strand
Strand 2	B	392	393	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	476	478	parallel
Strand 3	B	500	502	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	523	525	first strand
Strand 2	B	545	547	parallel
Strand 3	B	570	572	parallel
Strand 4	B	592	594	parallel
Strand 5	B	616	618	parallel
Strand 6	B	642	644	parallel
Strand 7	B	668	669	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	533	534	first strand
Strand 2	B	555	556	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	676	677	first strand
Strand 2	B	686	687	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	726	730	first strand
Strand 2	B	737	741	anti-parallel
Strand 3	B	764	767	parallel
Strand 4	B	788	790	parallel
Strand 5	B	812	814	parallel
Strand 6	B	836	838	parallel
Strand 7	B	860	862	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	774	775	first strand
Strand 2	B	798	799	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	804	805	first strand
Strand 2	B	828	829	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	936	940	first strand
Strand 2	B	964	968	anti-parallel

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There are 28 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	36	first strand
Strand 2	C	44	49	anti-parallel
Strand 3	C	73	77	parallel
Strand 4	C	98	102	parallel
Strand 5	C	122	126	parallel
Strand 6	C	150	154	parallel
Strand 7	C	174	176	parallel
Strand 8	C	198	200	parallel
Strand 9	C	221	223	parallel
Strand 10	C	243	245	parallel
Strand 11	C	263	265	parallel
Strand 12	C	286	288	parallel
Strand 13	C	309	311	parallel
Strand 14	C	334	336	parallel
Strand 15	C	358	360	parallel
Strand 16	C	382	384	parallel
Strand 17	C	405	407	parallel
Strand 18	C	428	430	parallel
Strand 19	C	452	454	parallel
Strand 20	C	476	478	parallel
Strand 21	C	500	502	parallel
Strand 22	C	523	525	parallel
Strand 23	C	545	547	parallel
Strand 24	C	570	572	parallel
Strand 25	C	592	594	parallel
Strand 26	C	616	618	parallel
Strand 27	C	642	644	parallel
Strand 28	C	668	669	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	136	first strand
Strand 2	C	159	160	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	369	first strand
Strand 2	C	392	393	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	602	603	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	651	652	first strand
Strand 2	C	676	679	parallel
Strand 3	C	685	687	anti-parallel

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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	698	700	first strand
Strand 2	C	726	730	anti-parallel
Strand 3	C	738	742	anti-parallel
Strand 4	C	764	768	parallel
Strand 5	C	788	790	parallel
Strand 6	C	812	814	parallel
Strand 7	C	836	838	parallel
Strand 8	C	860	862	parallel
Strand 9	C	882	884	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	702	704	first strand
Strand 2	C	719	721	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	774	775	first strand
Strand 2	C	798	799	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	804	805	first strand
Strand 2	C	828	829	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	936	940	first strand
Strand 2	C	964	968	anti-parallel

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There are 21 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	36	first strand
Strand 2	D	44	48	anti-parallel
Strand 3	D	71	77	parallel
Strand 4	D	98	102	parallel
Strand 5	D	122	126	parallel
Strand 6	D	150	154	parallel
Strand 7	D	174	176	parallel
Strand 8	D	198	200	parallel
Strand 9	D	221	223	parallel
Strand 10	D	243	245	parallel
Strand 11	D	263	265	parallel
Strand 12	D	286	288	parallel
Strand 13	D	309	311	parallel
Strand 14	D	334	336	parallel
Strand 15	D	358	360	parallel
Strand 16	D	382	384	parallel
Strand 17	D	405	407	parallel
Strand 18	D	428	430	parallel
Strand 19	D	452	454	parallel
Strand 20	D	476	478	parallel
Strand 21	D	500	502	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	136	first strand
Strand 2	D	159	160	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	369	first strand
Strand 2	D	392	393	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	523	525	first strand
Strand 2	D	545	547	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	580	581	first strand
Strand 2	D	602	603	parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	592	594	first strand
Strand 2	D	616	618	parallel
Strand 3	D	642	644	parallel
Strand 4	D	668	669	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	676	678	first strand
Strand 2	D	685	687	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	698	700	first strand
Strand 2	D	726	730	anti-parallel
Strand 3	D	737	741	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	702	704	first strand
Strand 2	D	719	721	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	764	767	first strand
Strand 2	D	788	791	parallel
Strand 3	D	812	814	parallel
Strand 4	D	836	838	parallel
Strand 5	D	860	862	parallel
Strand 6	D	882	884	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	774	775	first strand
Strand 2	D	798	799	parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	804	805	first strand
Strand 2	D	828	829	parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	889	890	first strand
Strand 2	D	936	940	parallel
Strand 3	D	964	968	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	33	first strand
Strand 2	E	39	44	anti-parallel
Strand 3	E	126	134	anti-parallel
Strand 4	E	58	67	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	48	52	first strand
Strand 2	E	105	109	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	33	first strand
Strand 2	F	39	44	anti-parallel
Strand 3	F	126	134	anti-parallel
Strand 4	F	58	67	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	48	52	first strand
Strand 2	F	105	109	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	32	33	first strand
Strand 2	G	39	44	anti-parallel
Strand 3	G	126	134	anti-parallel
Strand 4	G	58	67	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	48	52	first strand
Strand 2	G	105	109	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	32	33	first strand
Strand 2	H	38	44	anti-parallel
Strand 3	H	126	132	anti-parallel
Strand 4	H	60	67	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	48	52	first strand
Strand 2	H	105	109	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SUF

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SUF