Analysis of interatomic Contacts of Structural Units in PDB entry:
8SUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SUT entry

There are 2 chains in PDB entry 8SUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LEU 302
B
 MET 1GLU 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8SUT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 35Right-handed alpha
Helix 2
AA2
A
42 49Right-handed alpha
Helix 3
AA3
A
50 65Right-handed alpha
Helix 4
AA4
A
70 73Right-handed 310
Helix 5
AA5
A
79 81Right-handed 310
Helix 6
AA6
A
101 108Right-handed alpha
Helix 7
AA7
A
110 114Right-handed 310
Helix 8
AA8
A
124 126Right-handed 310
Helix 9
AA9
A
163 169Right-handed 310
Helix 10
AB1
A
183 190Right-handed alpha
Helix 11
AB2
A
192 197Right-handed alpha
Helix 12
AB3
A
212 214Right-handed 310
Helix 13
AB4
A
216 219Right-handed 310
Helix 14
AB5
A
237 239Right-handed 310
Helix 15
AB6
A
242 252Right-handed alpha
Helix 16
AB7
A
270 274Right-handed 310
Helix 17
AB8
B
26 35Right-handed alpha
Helix 18
AB9
B
42 49Right-handed alpha
Helix 19
AC1
B
50 64Right-handed alpha
Helix 20
AC2
B
70 73Right-handed 310
Helix 21
AC3
B
79 81Right-handed 310
Helix 22
AC4
B
101 108Right-handed alpha
Helix 23
AC5
B
124 126Right-handed 310
Helix 24
AC6
B
163 169Right-handed 310
Helix 25
AC7
B
183 190Right-handed alpha
Helix 26
AC8
B
192 197Right-handed alpha
Helix 27
AC9
B
212 214Right-handed 310
Helix 28
AD1
B
216 219Right-handed 310
Helix 29
AD2
B
237 239Right-handed 310
Helix 30
AD3
B
242 252Right-handed alpha
Helix 31
AD4
B
270 274Right-handed 310
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There are 8 sheets in PDB entry 8SUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 77first strand
Strand 2
A
22 25anti-parallel
Strand 3
A
11 18anti-parallel
Strand 4
A
2 8anti-parallel
Strand 5
A
202 210anti-parallel
Strand 6
A
171 178anti-parallel
Strand 7
A
149 155anti-parallel
Strand 8
A
261 263anti-parallel
Strand 9
A
94 98parallel
Strand 10
A
119 123anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 83first strand
Strand 2
A
2 8anti-parallel
Strand 3
A
202 210anti-parallel
Strand 4
A
128 129parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
294 300parallel
Strand 3
A
285 290anti-parallel
Strand 4
A
221 226anti-parallel
Strand 5
A
229 235anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 146first strand
Strand 2
A
181 182anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 77first strand
Strand 2
B
22 25anti-parallel
Strand 3
B
11 18anti-parallel
Strand 4
B
2 8anti-parallel
Strand 5
B
202 210anti-parallel
Strand 6
B
171 178anti-parallel
Strand 7
B
149 155anti-parallel
Strand 8
B
261 263anti-parallel
Strand 9
B
94 98parallel
Strand 10
B
119 123anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 84first strand
Strand 2
B
2 8anti-parallel
Strand 3
B
202 210anti-parallel
Strand 4
B
128 129parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 135first strand
Strand 2
B
294 300parallel
Strand 3
B
285 290anti-parallel
Strand 4
B
221 226anti-parallel
Strand 5
B
229 235anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 146first strand
Strand 2
B
181 182anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il