Analysis of interatomic Contacts of Structural Units in PDB entry:
8SV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SV2 entry

There is 1 chain in PDB entry 8SV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 26LEU 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8SV2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 50Right-handed alpha
Helix 2
AA2
A
68 73Right-handed alpha
Helix 3
AA3
A
90 98Right-handed alpha
Helix 4
AA4
A
113 128Right-handed alpha
Helix 5
AA5
A
143 152Right-handed alpha
Helix 6
AA6
A
157 176Right-handed alpha
Helix 7
AA7
A
182 187Right-handed alpha
Helix 8
AA8
A
188 193Right-handed 310
Helix 9
AA9
A
202 209Right-handed alpha
Helix 10
AB1
A
212 220Right-handed alpha
Helix 11
AB2
A
229 234Right-handed alpha
Helix 12
AB3
A
235 247Right-handed alpha
Helix 13
AB4
A
249 256Right-handed alpha
Helix 14
AB5
A
274 294Right-handed alpha
Helix 15
AB6
A
316 326Right-handed alpha
Helix 16
AB7
A
339 345Right-handed alpha
Helix 17
AB8
A
356 362Right-handed 310
Helix 18
AB9
A
363 365Right-handed 310
Helix 19
AC1
A
386 395Right-handed alpha
Helix 20
AC2
A
399 401Right-handed 310
Helix 21
AC3
A
407 409Right-handed 310
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There are 3 sheets in PDB entry 8SV2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
58 62parallel
Strand 3
A
27 34parallel
Strand 4
A
103 110parallel
Strand 5
A
132 140parallel
Strand 6
A
196 200parallel
Strand 7
A
223 225parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
87 88anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 332first strand
Strand 2
A
306 310parallel
Strand 3
A
262 266parallel
Strand 4
A
350 354parallel
Strand 5
A
367 372parallel
Strand 6
A
403 405parallel
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