Analysis of interatomic Contacts of Structural Units in PDB entry:
8SVD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SVD entry

There are 9 chains in PDB entry 8SVD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 10ASP 206
F
 ASP 10ASP 206
G
 GLU 8ASP 206
T
 ASP 10ASP 206
D
 T 13 T 31
B
 A 9 A 27
E
 ASP 10ASP 206
I
 ASP 10ASP 206
J
 ASP 10ARG 52
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 8SVD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 27Right-handed alpha
Helix 2
AA2
A
43 51Right-handed alpha
Helix 3
AA3
A
53 66Right-handed alpha
Helix 4
AA4
A
74 78Right-handed 310
Helix 5
AA5
A
82 101Right-handed alpha
Helix 6
AA6
A
101 111Right-handed alpha
Helix 7
AA7
A
121 133Right-handed alpha
Helix 8
AA8
A
133 152Right-handed alpha
Helix 9
AA9
A
159 171Right-handed alpha
Helix 10
AB1
A
172 177Right-handed 310
Helix 11
AB2
A
185 201Right-handed alpha
Helix 12
AB3
F
11 27Right-handed alpha
Helix 13
AB4
F
36 41Right-handed alpha
Helix 14
AB5
F
43 51Right-handed alpha
Helix 15
AB6
F
53 74Right-handed alpha
Helix 16
AB7
F
75 77Right-handed 310
Helix 17
AB8
F
82 101Right-handed alpha
Helix 18
AB9
F
101 107Right-handed alpha
Helix 19
AC1
F
111 118Right-handed alpha
Helix 20
AC2
F
121 146Right-handed alpha
Helix 21
AC3
F
146 152Right-handed alpha
Helix 22
AC4
F
161 173Right-handed alpha
Helix 23
AC5
F
174 177Right-handed 310
Helix 24
AC6
F
185 202Right-handed alpha
Helix 25
AC7
G
10 27Right-handed alpha
Helix 26
AC8
G
32 40Right-handed alpha
Helix 27
AC9
G
43 51Right-handed alpha
Helix 28
AD1
G
53 70Right-handed alpha
Helix 29
AD2
G
73 77Right-handed 310
Helix 30
AD3
G
82 101Right-handed alpha
Helix 31
AD4
G
101 107Right-handed alpha
Helix 32
AD5
G
108 110Right-handed 310
Helix 33
AD6
G
121 132Right-handed alpha
Helix 34
AD7
G
132 151Right-handed alpha
Helix 35
AD8
G
159 173Right-handed alpha
Helix 36
AD9
G
174 177Right-handed 310
Helix 37
AE1
G
185 203Right-handed alpha
Helix 38
AE2
T
11 27Right-handed alpha
Helix 39
AE3
T
32 41Right-handed alpha
Helix 40
AE4
T
43 50Right-handed alpha
Helix 41
AE5
T
54 74Right-handed alpha
Helix 42
AE6
T
75 77Right-handed 310
Helix 43
AE7
T
82 99Right-handed alpha
Helix 44
AE8
T
101 107Right-handed alpha
Helix 45
AE9
T
112 116Right-handed 310
Helix 46
AF1
T
121 151Right-handed alpha
Helix 47
AF2
T
159 172Right-handed alpha
Helix 48
AF3
T
173 177Right-handed 310
Helix 49
AF4
T
185 202Right-handed alpha
Helix 50
AF5
E
11 27Right-handed alpha
Helix 51
AF6
E
32 40Right-handed alpha
Helix 52
AF7
E
43 51Right-handed alpha
Helix 53
AF8
E
53 74Right-handed alpha
Helix 54
AF9
E
75 77Right-handed 310
Helix 55
AG1
E
84 99Right-handed alpha
Helix 56
AG2
E
101 106Right-handed alpha
Helix 57
AG3
E
106 111Right-handed alpha
Helix 58
AG4
E
121 152Right-handed alpha
Helix 59
AG5
E
159 173Right-handed alpha
Helix 60
AG6
E
185 203Right-handed alpha
Helix 61
AG7
I
13 26Right-handed alpha
Helix 62
AG8
I
32 41Right-handed alpha
Helix 63
AG9
I
46 51Right-handed alpha
Helix 64
AH1
I
54 74Right-handed alpha
Helix 65
AH2
I
75 79Right-handed 310
Helix 66
AH3
I
84 99Right-handed alpha
Helix 67
AH4
I
101 111Right-handed alpha
Helix 68
AH5
I
123 152Right-handed alpha
Helix 69
AH6
I
159 172Right-handed alpha
Helix 70
AH7
I
173 177Right-handed 310
Helix 71
AH8
I
185 193Right-handed alpha
Helix 72
AH9
I
193 199Right-handed alpha
Helix 73
AI1
J
11 27Right-handed alpha
Helix 74
AI2
J
32 40Right-handed alpha
Helix 75
AI3
J
43 51Right-handed alpha
Helix 76
AI4
J
54 66Right-handed alpha
Helix 77
AI5
J
66 74Right-handed alpha
Helix 78
AI6
J
75 77Right-handed 310
Helix 79
AI7
J
82 101Right-handed alpha
Helix 80
AI8
J
101 108Right-handed alpha
Helix 81
AI9
J
121 152Right-handed alpha
Helix 82
AJ1
J
161 171Right-handed alpha
Helix 83
AJ2
J
173 178Right-handed alpha
Helix 84
AJ3
J
185 202Right-handed alpha
Helix 85
AJ4
K
11 27Right-handed alpha
Helix 86
AJ5
K
32 39Right-handed alpha
Helix 87
AJ6
K
43 51Right-handed alpha
Helix 88
AJ7
K
54 74Right-handed alpha
Helix 89
AJ8
K
75 77Right-handed 310
Helix 90
AJ9
K
82 99Right-handed alpha
Helix 91
AK1
K
101 108Right-handed alpha
Helix 92
AK2
K
121 153Right-handed alpha
Helix 93
AK3
K
159 170Right-handed alpha
Helix 94
AK4
K
171 177Right-handed 310
Helix 95
AK5
K
185 203Right-handed alpha
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There are no sheets in PDB entry 8SVD
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