Analysis of interatomic Contacts of Structural Units in PDB entry:
8SW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SW0 entry

There is 1 chain in PDB entry 8SW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 51ALA 914
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 8SW0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
183 187Right-handed 310
Helix 2
AA2
A
242 246Right-handed 310
Helix 3
AA3
A
274 277Right-handed 310
Helix 4
AA4
A
278 297Right-handed alpha
Helix 5
AA5
A
328 332Right-handed alpha
Helix 6
AA6
A
341 357Right-handed alpha
Helix 7
AA7
A
367 369Right-handed 310
Helix 8
AA8
A
370 390Right-handed alpha
Helix 9
AA9
A
391 393Right-handed 310
Helix 10
AB1
A
394 412Right-handed alpha
Helix 11
AB2
A
428 433Right-handed alpha
Helix 12
AB3
A
434 453Right-handed alpha
Helix 13
AB4
A
453 468Right-handed alpha
Helix 14
AB5
A
474 487Right-handed alpha
Helix 15
AB6
A
489 499Right-handed alpha
Helix 16
AB7
A
583 586Right-handed 310
Helix 17
AB8
A
594 607Right-handed alpha
Helix 18
AB9
A
611 628Right-handed alpha
Helix 19
AC1
A
632 641Right-handed alpha
Helix 20
AC2
A
642 644Right-handed 310
Helix 21
AC3
A
648 666Right-handed alpha
Helix 22
AC4
A
667 669Right-handed 310
Helix 23
AC5
A
671 691Right-handed alpha
Helix 24
AC6
A
699 716Right-handed alpha
Helix 25
AC7
A
718 734Right-handed alpha
Helix 26
AC8
A
743 754Right-handed alpha
Helix 27
AC9
A
756 769Right-handed alpha
Helix 28
AD1
A
772 781Right-handed alpha
Helix 29
AD2
A
782 786Right-handed 310
Helix 30
AD3
A
788 800Right-handed alpha
Helix 31
AD4
A
805 807Right-handed 310
Helix 32
AD5
A
808 818Right-handed alpha
Helix 33
AD6
A
820 834Right-handed alpha
Helix 34
AD7
A
834 843Right-handed alpha
Helix 35
AD8
A
845 857Right-handed alpha
Helix 36
AD9
A
861 875Right-handed alpha
Helix 37
AE1
A
877 879Right-handed 310
Helix 38
AE2
A
880 914Right-handed alpha
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There are 9 sheets in PDB entry 8SW0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 116first strand
Strand 2
A
101 109anti-parallel
Strand 3
A
140 151anti-parallel
Strand 4
A
75 86anti-parallel
Strand 5
A
58 70anti-parallel
Strand 6
A
199 207parallel
Strand 7
A
230 235anti-parallel
Strand 8
A
218 223anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 96first strand
Strand 2
A
128 132anti-parallel
Strand 3
A
119 123anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 164first strand
Strand 2
A
172 178anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 214first strand
Strand 2
A
248 251anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 259first strand
Strand 2
A
265 271anti-parallel
Strand 3
A
304 310parallel
Strand 4
A
323 327parallel
Strand 5
A
317 318anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 365first strand
Strand 2
A
471 473parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 531first strand
Strand 2
A
516 527anti-parallel
Strand 3
A
565 570anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 531first strand
Strand 2
A
516 527anti-parallel
Strand 3
A
504 513anti-parallel
Strand 4
A
590 593parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
557 561first strand
Strand 2
A
542 548anti-parallel
Strand 3
A
579 581anti-parallel
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