Analysis of interatomic Contacts of Structural Units in PDB entry:
8SX2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SX2 entry

There are 2 chains in PDB entry 8SX2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 242GLY 568
B
 SER 242GLY 568
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8SX2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
242 255Right-handed alpha
Helix 2
AA2
A
260 280Right-handed alpha
Helix 3
AA3
A
285 289Right-handed 310
Helix 4
AA4
A
290 311Right-handed alpha
Helix 5
AA5
A
313 328Right-handed alpha
Helix 6
AA6
A
339 360Right-handed alpha
Helix 7
AA7
A
369 379Right-handed alpha
Helix 8
AA8
A
389 400Right-handed alpha
Helix 9
AA9
A
419 425Right-handed alpha
Helix 10
AB1
A
441 443Right-handed 310
Helix 11
AB2
A
444 452Right-handed alpha
Helix 12
AB3
A
481 486Right-handed alpha
Helix 13
AB4
A
552 554Right-handed 310
Helix 14
AB5
B
243 255Right-handed alpha
Helix 15
AB6
B
260 281Right-handed alpha
Helix 16
AB7
B
285 289Right-handed 310
Helix 17
AB8
B
290 311Right-handed alpha
Helix 18
AB9
B
313 328Right-handed alpha
Helix 19
AC1
B
339 360Right-handed alpha
Helix 20
AC2
B
370 379Right-handed alpha
Helix 21
AC3
B
389 400Right-handed alpha
Helix 22
AC4
B
419 425Right-handed alpha
Helix 23
AC5
B
441 443Right-handed 310
Helix 24
AC6
B
444 452Right-handed alpha
Helix 25
AC7
B
481 486Right-handed alpha
Helix 26
AC8
B
552 554Right-handed 310
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There are 4 sheets in PDB entry 8SX2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 384first strand
Strand 2
A
413 416anti-parallel
Strand 3
A
556 564anti-parallel
Strand 4
A
498 506anti-parallel
Strand 5
A
433 440anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 478first strand
Strand 2
A
547 550anti-parallel
Strand 3
A
529 532anti-parallel
Strand 4
A
510 513parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
383 384first strand
Strand 2
B
413 416anti-parallel
Strand 3
B
556 564anti-parallel
Strand 4
B
498 506anti-parallel
Strand 5
B
433 440anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
476 478first strand
Strand 2
B
547 550anti-parallel
Strand 3
B
529 532anti-parallel
Strand 4
B
510 513parallel
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