Analysis of interatomic Contacts of Structural Units in PDB entry:
8SXB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SXB entry

There is 1 chain in PDB entry 8SXB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1366PRO 2618
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 8SXB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1368 1371Right-handed 310
Helix 2
AA2
A
1372 1394Right-handed alpha
Helix 3
AA3
A
1399 1414Right-handed alpha
Helix 4
AA4
A
1415 1442Right-handed alpha
Helix 5
AA5
A
1447 1501Right-handed alpha
Helix 6
AA6
A
1504 1509Right-handed 310
Helix 7
AA7
A
1510 1520Right-handed alpha
Helix 8
AA8
A
1521 1523Right-handed 310
Helix 9
AA9
A
1524 1532Right-handed alpha
Helix 10
AB1
A
1533 1554Right-handed alpha
Helix 11
AB2
A
1556 1602Right-handed alpha
Helix 12
AB3
A
1602 1609Right-handed alpha
Helix 13
AB4
A
1611 1662Right-handed alpha
Helix 14
AB5
A
1667 1685Right-handed alpha
Helix 15
AB6
A
1687 1711Right-handed alpha
Helix 16
AB7
A
1770 1779Right-handed alpha
Helix 17
AB8
A
1809 1815Right-handed alpha
Helix 18
AB9
A
1820 1831Right-handed alpha
Helix 19
AC1
A
1833 1840Right-handed alpha
Helix 20
AC2
A
1842 1845Right-handed 310
Helix 21
AC3
A
1856 1871Right-handed alpha
Helix 22
AC4
A
1881 1885Right-handed 310
Helix 23
AC5
A
1886 1897Right-handed alpha
Helix 24
AC6
A
1913 1920Right-handed 310
Helix 25
AC7
A
2017 2027Right-handed alpha
Helix 26
AC8
A
2030 2065Right-handed alpha
Helix 27
AC9
A
2080 2128Right-handed alpha
Helix 28
AD1
A
2129 2136Right-handed alpha
Helix 29
AD2
A
2137 2154Right-handed alpha
Helix 30
AD3
A
2154 2181Right-handed alpha
Helix 31
AD4
A
2184 2230Right-handed alpha
Helix 32
AD5
A
2230 2235Right-handed alpha
Helix 33
AD6
A
2239 2290Right-handed alpha
Helix 34
AD7
A
2295 2335Right-handed alpha
Helix 35
AD8
A
2336 2339Right-handed 310
Helix 36
AD9
A
2400 2409Right-handed alpha
Helix 37
AE1
A
2426 2428Right-handed 310
Helix 38
AE2
A
2429 2436Right-handed alpha
Helix 39
AE3
A
2450 2456Right-handed alpha
Helix 40
AE4
A
2462 2473Right-handed alpha
Helix 41
AE5
A
2475 2481Right-handed alpha
Helix 42
AE6
A
2484 2488Right-handed 310
Helix 43
AE7
A
2491 2495Right-handed 310
Helix 44
AE8
A
2498 2513Right-handed alpha
Helix 45
AE9
A
2523 2527Right-handed 310
Helix 46
AF1
A
2528 2543Right-handed alpha
Helix 47
AF2
A
2554 2558Right-handed 310
Helix 48
AF3
A
2577 2584Right-handed alpha
Helix 49
AF4
A
2587 2597Right-handed alpha
Helix 50
AF5
A
2597 2617Right-handed alpha
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There are 5 sheets in PDB entry 8SXB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1748 1755first strand
Strand 2
A
1730 1737anti-parallel
Strand 3
A
1786 1791anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1795 1798first strand
Strand 2
A
1875 1879parallel
Strand 3
A
1906 1910parallel
Strand 4
A
1760 1764parallel
Strand 5
A
1922 1927parallel
Strand 6
A
1930 1935anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1807 1808first strand
Strand 2
A
1847 1848anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2378 2385first strand
Strand 2
A
2361 2368anti-parallel
Strand 3
A
2415 2420anti-parallel
Strand 4
A
2423 2424anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2438 2440first strand
Strand 2
A
2517 2521parallel
Strand 3
A
2547 2551parallel
Strand 4
A
2390 2395parallel
Strand 5
A
2563 2567parallel
Strand 6
A
2572 2576anti-parallel
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