Analysis of interatomic Contacts of Structural Units in PDB entry:
8SXG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SXG entry

There are 5 chains in PDB entry 8SXG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 38	ASN 436
B	SER 38	ASN 436
C	LYS 44	PRO 575
D	UNK 64	UNK 69
E	SER 193	ASN 436

There are 60 helices in PDB entry 8SXG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	60	Right-handed alpha
Helix 2	AA2	A	65	82	Right-handed alpha
Helix 3	AA3	A	89	101	Right-handed alpha
Helix 4	AA4	A	129	133	Right-handed 310
Helix 5	AA5	A	152	161	Right-handed alpha
Helix 6	AA6	A	214	230	Right-handed alpha
Helix 7	AA7	A	248	260	Right-handed alpha
Helix 8	AA8	A	272	276	Right-handed 310
Helix 9	AA9	A	301	314	Right-handed alpha
Helix 10	AB1	A	412	417	Right-handed alpha
Helix 11	AB2	A	417	434	Right-handed alpha
Helix 12	AB3	B	42	60	Right-handed alpha
Helix 13	AB4	B	65	80	Right-handed alpha
Helix 14	AB5	B	89	98	Right-handed alpha
Helix 15	AB6	B	127	132	Right-handed alpha
Helix 16	AB7	B	152	161	Right-handed alpha
Helix 17	AB8	B	214	230	Right-handed alpha
Helix 18	AB9	B	248	259	Right-handed alpha
Helix 19	AC1	B	272	276	Right-handed 310
Helix 20	AC2	B	302	314	Right-handed alpha
Helix 21	AC3	B	356	361	Right-handed alpha
Helix 22	AC4	B	412	417	Right-handed alpha
Helix 23	AC5	B	417	435	Right-handed alpha
Helix 24	AC6	C	51	63	Right-handed alpha
Helix 25	AC7	C	67	83	Right-handed alpha
Helix 26	AC8	C	84	99	Right-handed alpha
Helix 27	AC9	C	101	115	Right-handed alpha
Helix 28	AD1	C	118	133	Right-handed alpha
Helix 29	AD2	C	136	146	Right-handed alpha
Helix 30	AD3	C	154	163	Right-handed alpha
Helix 31	AD4	C	165	183	Right-handed alpha
Helix 32	AD5	C	186	201	Right-handed alpha
Helix 33	AD6	C	202	213	Right-handed alpha
Helix 34	AD7	C	213	219	Right-handed alpha
Helix 35	AD8	C	219	233	Right-handed alpha
Helix 36	AD9	C	235	250	Right-handed alpha
Helix 37	AE1	C	253	267	Right-handed alpha
Helix 38	AE2	C	269	284	Right-handed alpha
Helix 39	AE3	C	287	301	Right-handed alpha
Helix 40	AE4	C	303	318	Right-handed alpha
Helix 41	AE5	C	320	335	Right-handed alpha
Helix 42	AE6	C	338	348	Right-handed alpha
Helix 43	AE7	C	353	369	Right-handed alpha
Helix 44	AE8	C	370	385	Right-handed alpha
Helix 45	AE9	C	385	403	Right-handed alpha
Helix 46	AF1	C	405	420	Right-handed alpha
Helix 47	AF2	C	423	438	Right-handed alpha
Helix 48	AF3	C	439	454	Right-handed alpha
Helix 49	AF4	C	457	471	Right-handed alpha
Helix 50	AF5	C	475	489	Right-handed alpha
Helix 51	AF6	C	492	507	Right-handed alpha
Helix 52	AF7	C	509	523	Right-handed alpha
Helix 53	AF8	C	525	540	Right-handed alpha
Helix 54	AF9	C	541	556	Right-handed alpha
Helix 55	AG1	C	560	571	Right-handed alpha
Helix 56	AG2	E	214	230	Right-handed alpha
Helix 57	AG3	E	248	260	Right-handed alpha
Helix 58	AG4	E	302	314	Right-handed alpha
Helix 59	AG5	E	412	417	Right-handed alpha
Helix 60	AG6	E	417	433	Right-handed alpha

There are 14 sheets in PDB entry 8SXG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	87	first strand
Strand 2	A	342	350	anti-parallel
Strand 3	A	267	269	anti-parallel
Strand 4	A	277	278	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	87	first strand
Strand 2	A	342	350	anti-parallel
Strand 3	A	330	334	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	106	first strand
Strand 2	A	187	190	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	114	first strand
Strand 2	A	117	123	anti-parallel
Strand 3	A	138	143	anti-parallel
Strand 4	A	146	147	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	114	first strand
Strand 2	A	117	123	anti-parallel
Strand 3	A	138	143	anti-parallel
Strand 4	A	167	174	anti-parallel
Strand 5	A	180	185	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	200	first strand
Strand 2	A	203	208	anti-parallel
Strand 3	A	236	240	parallel
Strand 4	A	292	296	parallel
Strand 5	A	317	321	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	375	first strand
Strand 2	E	371	374	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	114	first strand
Strand 2	B	117	122	anti-parallel
Strand 3	B	139	143	anti-parallel
Strand 4	B	146	147	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	114	first strand
Strand 2	B	117	122	anti-parallel
Strand 3	B	139	143	anti-parallel
Strand 4	B	166	173	anti-parallel
Strand 5	B	180	186	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	194	200	first strand
Strand 2	B	203	208	anti-parallel
Strand 3	B	237	239	parallel
Strand 4	B	292	294	parallel
Strand 5	B	317	319	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	277	278	first strand
Strand 2	B	267	270	anti-parallel
Strand 3	B	347	350	anti-parallel
Strand 4	B	329	330	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	335	first strand
Strand 2	B	341	342	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	197	200	first strand
Strand 2	E	203	207	anti-parallel
Strand 3	E	237	240	parallel
Strand 4	E	292	294	parallel
Strand 5	E	317	319	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	264	266	first strand
Strand 2	E	279	280	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SXG

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SXG