Analysis of interatomic Contacts of Structural Units in PDB entry:
8SXW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SXW entry

There are 4 chains in PDB entry 8SXW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 361
B	TRP 2	LYS 360
C	HIS 0	GLY 362
D	GLY -1	LYS 360

There are 72 helices in PDB entry 8SXW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	26	Right-handed alpha
Helix 2	AA2	A	44	54	Right-handed alpha
Helix 3	AA3	A	69	89	Right-handed alpha
Helix 4	AA4	A	99	112	Right-handed alpha
Helix 5	AA5	A	132	143	Right-handed alpha
Helix 6	AA6	A	150	159	Right-handed alpha
Helix 7	AA7	A	163	165	Right-handed 310
Helix 8	AA8	A	172	189	Right-handed alpha
Helix 9	AA9	A	190	196	Right-handed alpha
Helix 10	AB1	A	209	214	Right-handed alpha
Helix 11	AB2	A	215	231	Right-handed alpha
Helix 12	AB3	A	240	250	Right-handed alpha
Helix 13	AB4	A	252	259	Right-handed alpha
Helix 14	AB5	A	266	277	Right-handed alpha
Helix 15	AB6	A	284	294	Right-handed alpha
Helix 16	AB7	A	307	313	Right-handed alpha
Helix 17	AB8	A	323	335	Right-handed alpha
Helix 18	AB9	A	349	361	Right-handed alpha
Helix 19	AC1	B	11	26	Right-handed alpha
Helix 20	AC2	B	44	54	Right-handed alpha
Helix 21	AC3	B	69	89	Right-handed alpha
Helix 22	AC4	B	99	112	Right-handed alpha
Helix 23	AC5	B	132	143	Right-handed alpha
Helix 24	AC6	B	150	160	Right-handed alpha
Helix 25	AC7	B	163	165	Right-handed 310
Helix 26	AC8	B	172	189	Right-handed alpha
Helix 27	AC9	B	190	196	Right-handed alpha
Helix 28	AD1	B	209	214	Right-handed alpha
Helix 29	AD2	B	215	233	Right-handed alpha
Helix 30	AD3	B	240	250	Right-handed alpha
Helix 31	AD4	B	252	257	Right-handed alpha
Helix 32	AD5	B	266	277	Right-handed alpha
Helix 33	AD6	B	284	294	Right-handed alpha
Helix 34	AD7	B	307	313	Right-handed alpha
Helix 35	AD8	B	323	335	Right-handed alpha
Helix 36	AD9	B	349	359	Right-handed alpha
Helix 37	AE1	C	11	26	Right-handed alpha
Helix 38	AE2	C	44	54	Right-handed alpha
Helix 39	AE3	C	69	89	Right-handed alpha
Helix 40	AE4	C	99	112	Right-handed alpha
Helix 41	AE5	C	132	143	Right-handed alpha
Helix 42	AE6	C	150	160	Right-handed alpha
Helix 43	AE7	C	163	165	Right-handed 310
Helix 44	AE8	C	172	189	Right-handed alpha
Helix 45	AE9	C	190	196	Right-handed alpha
Helix 46	AF1	C	209	214	Right-handed alpha
Helix 47	AF2	C	215	233	Right-handed alpha
Helix 48	AF3	C	240	250	Right-handed alpha
Helix 49	AF4	C	251	257	Right-handed 310
Helix 50	AF5	C	266	276	Right-handed alpha
Helix 51	AF6	C	284	294	Right-handed alpha
Helix 52	AF7	C	307	313	Right-handed alpha
Helix 53	AF8	C	323	335	Right-handed alpha
Helix 54	AF9	C	349	362	Right-handed alpha
Helix 55	AG1	D	11	26	Right-handed alpha
Helix 56	AG2	D	44	54	Right-handed alpha
Helix 57	AG3	D	69	89	Right-handed alpha
Helix 58	AG4	D	99	111	Right-handed alpha
Helix 59	AG5	D	132	143	Right-handed alpha
Helix 60	AG6	D	150	160	Right-handed alpha
Helix 61	AG7	D	163	165	Right-handed 310
Helix 62	AG8	D	172	189	Right-handed alpha
Helix 63	AG9	D	190	196	Right-handed alpha
Helix 64	AH1	D	209	214	Right-handed alpha
Helix 65	AH2	D	215	233	Right-handed alpha
Helix 66	AH3	D	240	250	Right-handed alpha
Helix 67	AH4	D	252	257	Right-handed alpha
Helix 68	AH5	D	266	277	Right-handed alpha
Helix 69	AH6	D	284	294	Right-handed alpha
Helix 70	AH7	D	307	313	Right-handed alpha
Helix 71	AH8	D	323	335	Right-handed alpha
Helix 72	AH9	D	349	360	Right-handed alpha

There are 8 sheets in PDB entry 8SXW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	62	first strand
Strand 2	A	31	37	parallel
Strand 3	A	3	9	parallel
Strand 4	A	92	96	parallel
Strand 5	A	116	119	parallel
Strand 6	A	145	148	parallel
Strand 7	A	167	169	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	260	262	first strand
Strand 2	A	235	238	parallel
Strand 3	A	203	206	parallel
Strand 4	A	279	282	parallel
Strand 5	A	298	300	parallel
Strand 6	A	316	318	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	31	37	parallel
Strand 3	B	3	9	parallel
Strand 4	B	92	96	parallel
Strand 5	B	116	119	parallel
Strand 6	B	145	148	parallel
Strand 7	B	167	169	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	260	262	first strand
Strand 2	B	235	238	parallel
Strand 3	B	203	206	parallel
Strand 4	B	279	282	parallel
Strand 5	B	298	300	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	62	first strand
Strand 2	C	31	37	parallel
Strand 3	C	3	9	parallel
Strand 4	C	92	96	parallel
Strand 5	C	116	119	parallel
Strand 6	C	145	148	parallel
Strand 7	C	167	169	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	260	262	first strand
Strand 2	C	235	238	parallel
Strand 3	C	203	206	parallel
Strand 4	C	279	282	parallel
Strand 5	C	298	300	parallel
Strand 6	C	316	318	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	62	first strand
Strand 2	D	31	37	parallel
Strand 3	D	3	9	parallel
Strand 4	D	92	96	parallel
Strand 5	D	116	119	parallel
Strand 6	D	145	148	parallel
Strand 7	D	167	169	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	260	262	first strand
Strand 2	D	235	238	parallel
Strand 3	D	203	206	parallel
Strand 4	D	279	282	parallel
Strand 5	D	298	300	parallel
Strand 6	D	316	318	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SXW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SXW