Analysis of interatomic Contacts of Structural Units in PDB entry:
8SZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SZT entry

There are 4 chains in PDB entry 8SZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 3ASN 370
A
 LYS 3ASN 370
C
 LYS 2ASN 370
D
 LYS 3ASN 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 8SZT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
9 15Right-handed 310
Helix 2
AA2
B
41 54Right-handed alpha
Helix 3
AA3
B
55 58Right-handed 310
Helix 4
AA4
B
69 75Right-handed alpha
Helix 5
AA5
B
78 91Right-handed alpha
Helix 6
AA6
B
108 128Right-handed alpha
Helix 7
AA7
B
157 169Right-handed alpha
Helix 8
AA8
B
185 192Right-handed alpha
Helix 9
AA9
B
221 225Right-handed 310
Helix 10
AB1
B
238 249Right-handed alpha
Helix 11
AB2
B
249 258Right-handed alpha
Helix 12
AB3
B
282 301Right-handed alpha
Helix 13
AB4
B
317 331Right-handed alpha
Helix 14
AB5
B
352 364Right-handed alpha
Helix 15
AB6
B
365 369Right-handed 310
Helix 16
AB7
A
9 14Right-handed 310
Helix 17
AB8
A
41 54Right-handed alpha
Helix 18
AB9
A
55 60Right-handed 310
Helix 19
AC1
A
69 75Right-handed alpha
Helix 20
AC2
A
78 91Right-handed alpha
Helix 21
AC3
A
108 128Right-handed alpha
Helix 22
AC4
A
157 171Right-handed alpha
Helix 23
AC5
A
185 192Right-handed alpha
Helix 24
AC6
A
221 225Right-handed 310
Helix 25
AC7
A
238 249Right-handed alpha
Helix 26
AC8
A
249 258Right-handed alpha
Helix 27
AC9
A
282 301Right-handed alpha
Helix 28
AD1
A
317 331Right-handed alpha
Helix 29
AD2
A
352 365Right-handed alpha
Helix 30
AD3
A
366 369Right-handed 310
Helix 31
AD4
C
9 15Right-handed 310
Helix 32
AD5
C
41 54Right-handed alpha
Helix 33
AD6
C
55 60Right-handed 310
Helix 34
AD7
C
69 75Right-handed alpha
Helix 35
AD8
C
78 91Right-handed alpha
Helix 36
AD9
C
108 129Right-handed alpha
Helix 37
AE1
C
157 169Right-handed alpha
Helix 38
AE2
C
185 192Right-handed alpha
Helix 39
AE3
C
221 225Right-handed 310
Helix 40
AE4
C
238 249Right-handed alpha
Helix 41
AE5
C
249 258Right-handed alpha
Helix 42
AE6
C
282 302Right-handed alpha
Helix 43
AE7
C
317 331Right-handed alpha
Helix 44
AE8
C
352 364Right-handed alpha
Helix 45
AE9
C
365 369Right-handed 310
Helix 46
AF1
D
9 14Right-handed 310
Helix 47
AF2
D
41 54Right-handed alpha
Helix 48
AF3
D
55 60Right-handed 310
Helix 49
AF4
D
69 75Right-handed alpha
Helix 50
AF5
D
78 91Right-handed alpha
Helix 51
AF6
D
108 128Right-handed alpha
Helix 52
AF7
D
157 169Right-handed alpha
Helix 53
AF8
D
185 192Right-handed alpha
Helix 54
AF9
D
221 225Right-handed 310
Helix 55
AG1
D
238 249Right-handed alpha
Helix 56
AG2
D
249 258Right-handed alpha
Helix 57
AG3
D
282 301Right-handed alpha
Helix 58
AG4
D
317 331Right-handed alpha
Helix 59
AG5
D
352 364Right-handed alpha
Helix 60
AG6
D
365 369Right-handed 310
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There are 7 sheets in PDB entry 8SZT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 63first strand
Strand 2
B
4 7parallel
Strand 3
B
133 136parallel
Strand 4
B
305 309parallel
Strand 5
B
261 266parallel
Strand 6
B
175 179parallel
Strand 7
B
198 205parallel
Strand 8
B
228 233parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
4 7parallel
Strand 3
A
133 136parallel
Strand 4
A
305 309parallel
Strand 5
A
261 266parallel
Strand 6
A
175 179parallel
Strand 7
A
198 205parallel
Strand 8
A
228 233parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
103 104anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 63first strand
Strand 2
C
4 7parallel
Strand 3
C
133 136parallel
Strand 4
C
305 309parallel
Strand 5
C
261 266parallel
Strand 6
C
175 179parallel
Strand 7
C
198 205parallel
Strand 8
C
228 233parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 96first strand
Strand 2
C
103 104anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 63first strand
Strand 2
D
4 7parallel
Strand 3
D
133 136parallel
Strand 4
D
305 309parallel
Strand 5
D
261 266parallel
Strand 6
D
175 179parallel
Strand 7
D
198 205parallel
Strand 8
D
228 233parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
95 96first strand
Strand 2
D
103 104anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il