Analysis of interatomic Contacts of Structural Units in PDB entry:
8SZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8SZU entry

There are 2 chains in PDB entry 8SZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1ASN 370
B
 LYS 2ILE 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8SZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 14Right-handed 310
Helix 2
AA2
A
26 30Right-handed 310
Helix 3
AA3
A
41 54Right-handed alpha
Helix 4
AA4
A
55 60Right-handed 310
Helix 5
AA5
A
69 75Right-handed alpha
Helix 6
AA6
A
78 91Right-handed alpha
Helix 7
AA7
A
108 128Right-handed alpha
Helix 8
AA8
A
157 169Right-handed alpha
Helix 9
AA9
A
185 192Right-handed alpha
Helix 10
AB1
A
221 225Right-handed 310
Helix 11
AB2
A
238 249Right-handed alpha
Helix 12
AB3
A
249 258Right-handed alpha
Helix 13
AB4
A
282 302Right-handed alpha
Helix 14
AB5
A
317 331Right-handed alpha
Helix 15
AB6
A
339 344Right-handed alpha
Helix 16
AB7
A
352 364Right-handed alpha
Helix 17
AB8
A
365 369Right-handed 310
Helix 18
AB9
B
9 14Right-handed 310
Helix 19
AC1
B
41 54Right-handed alpha
Helix 20
AC2
B
55 58Right-handed 310
Helix 21
AC3
B
69 75Right-handed alpha
Helix 22
AC4
B
78 87Right-handed alpha
Helix 23
AC5
B
108 128Right-handed alpha
Helix 24
AC6
B
157 169Right-handed alpha
Helix 25
AC7
B
185 192Right-handed alpha
Helix 26
AC8
B
221 225Right-handed 310
Helix 27
AC9
B
238 249Right-handed alpha
Helix 28
AD1
B
249 258Right-handed alpha
Helix 29
AD2
B
282 301Right-handed alpha
Helix 30
AD3
B
317 331Right-handed alpha
Helix 31
AD4
B
339 345Right-handed alpha
Helix 32
AD5
B
352 364Right-handed alpha
Helix 33
AD6
B
365 369Right-handed 310
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There are 3 sheets in PDB entry 8SZU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
4 7parallel
Strand 3
A
133 136parallel
Strand 4
A
305 309parallel
Strand 5
A
261 266parallel
Strand 6
A
175 179parallel
Strand 7
A
198 205parallel
Strand 8
A
228 233parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
103 104anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 63first strand
Strand 2
B
4 7parallel
Strand 3
B
133 136parallel
Strand 4
B
305 309parallel
Strand 5
B
261 266parallel
Strand 6
B
175 179parallel
Strand 7
B
198 205parallel
Strand 8
B
228 233parallel
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