Analysis of interatomic Contacts of Structural Units in PDB entry:
8SZW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8SZW entry

There are 7 chains in PDB entry 8SZW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	THR 6	VAL 237
H	GLY 3	ASP 233
I	VAL 2	ASP 1341
J	GLU 16	ALA 1375
K	ALA 2	GLU 71
A	A 6	A 32
B	T 101	T 131

There are111 helices in PDB entry 8SZW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	50	Right-handed alpha
Helix 2	AA2	G	77	87	Right-handed alpha
Helix 3	AA3	G	113	115	Right-handed 310
Helix 4	AA4	G	154	159	Right-handed alpha
Helix 5	AA5	G	212	228	Right-handed alpha
Helix 6	AA6	G	228	233	Right-handed alpha
Helix 7	AA7	H	34	50	Right-handed alpha
Helix 8	AA8	H	77	88	Right-handed alpha
Helix 9	AA9	H	113	115	Right-handed 310
Helix 10	AB1	H	212	228	Right-handed alpha
Helix 11	AB2	I	4	10	Right-handed alpha
Helix 12	AB3	I	28	39	Right-handed alpha
Helix 13	AB4	I	48	57	Right-handed alpha
Helix 14	AB5	I	81	89	Right-handed alpha
Helix 15	AB6	I	198	201	Right-handed 310
Helix 16	AB7	I	206	213	Right-handed alpha
Helix 17	AB8	I	216	225	Right-handed alpha
Helix 18	AB9	I	242	247	Right-handed 310
Helix 19	AC1	I	270	281	Right-handed alpha
Helix 20	AC2	I	288	293	Right-handed 310
Helix 21	AC3	I	318	328	Right-handed alpha
Helix 22	AC4	I	345	354	Right-handed alpha
Helix 23	AC5	I	358	371	Right-handed alpha
Helix 24	AC6	I	377	390	Right-handed alpha
Helix 25	AC7	I	399	409	Right-handed alpha
Helix 26	AC8	I	421	438	Right-handed alpha
Helix 27	AC9	I	447	451	Right-handed 310
Helix 28	AD1	I	455	482	Right-handed alpha
Helix 29	AD2	I	495	508	Right-handed alpha
Helix 30	AD3	I	519	528	Right-handed alpha
Helix 31	AD4	I	539	543	Right-handed 310
Helix 32	AD5	I	551	555	Right-handed 310
Helix 33	AD6	I	609	614	Right-handed alpha
Helix 34	AD7	I	656	661	Right-handed 310
Helix 35	AD8	I	670	674	Right-handed 310
Helix 36	AD9	I	675	686	Right-handed alpha
Helix 37	AE1	I	705	712	Right-handed alpha
Helix 38	AE2	I	713	716	Right-handed 310
Helix 39	AE3	I	738	741	Right-handed 310
Helix 40	AE4	I	820	825	Right-handed alpha
Helix 41	AE5	I	859	864	Right-handed alpha
Helix 42	AE6	I	942	981	Right-handed alpha
Helix 43	AE7	I	993	999	Right-handed 310
Helix 44	AE8	I	1005	1009	Right-handed 310
Helix 45	AE9	I	1010	1038	Right-handed alpha
Helix 46	AF1	I	1101	1107	Right-handed alpha
Helix 47	AF2	I	1109	1134	Right-handed alpha
Helix 48	AF3	I	1138	1150	Right-handed alpha
Helix 49	AF4	I	1165	1177	Right-handed alpha
Helix 50	AF5	I	1191	1202	Right-handed alpha
Helix 51	AF6	I	1238	1243	Right-handed alpha
Helix 52	AF7	I	1261	1265	Right-handed 310
Helix 53	AF8	I	1271	1280	Right-handed alpha
Helix 54	AF9	I	1284	1292	Right-handed alpha
Helix 55	AG1	I	1297	1310	Right-handed alpha
Helix 56	AG2	I	1320	1333	Right-handed alpha
Helix 57	AG3	J	26	34	Right-handed alpha
Helix 58	AG4	J	77	81	Right-handed 310
Helix 59	AG5	J	94	100	Right-handed 310
Helix 60	AG6	J	114	119	Right-handed alpha
Helix 61	AG7	J	122	128	Right-handed alpha
Helix 62	AG8	J	131	140	Right-handed alpha
Helix 63	AG9	J	161	172	Right-handed alpha
Helix 64	AH1	J	180	191	Right-handed alpha
Helix 65	AH2	J	193	208	Right-handed alpha
Helix 66	AH3	J	210	230	Right-handed alpha
Helix 67	AH4	J	233	236	Right-handed 310
Helix 68	AH5	J	246	250	Right-handed 310
Helix 69	AH6	J	263	286	Right-handed alpha
Helix 70	AH7	J	288	308	Right-handed alpha
Helix 71	AH8	J	326	332	Right-handed alpha
Helix 72	AH9	J	336	341	Right-handed alpha
Helix 73	AI1	J	370	377	Right-handed alpha
Helix 74	AI2	J	377	389	Right-handed alpha
Helix 75	AI3	J	393	404	Right-handed alpha
Helix 76	AI4	J	406	417	Right-handed alpha
Helix 77	AI5	J	430	432	Right-handed 310
Helix 78	AI6	J	452	458	Right-handed alpha
Helix 79	AI7	J	473	483	Right-handed alpha
Helix 80	AI8	J	505	514	Right-handed alpha
Helix 81	AI9	J	529	539	Right-handed alpha
Helix 82	AJ1	J	574	580	Right-handed alpha
Helix 83	AJ2	J	588	593	Right-handed 310
Helix 84	AJ3	J	597	613	Right-handed alpha
Helix 85	AJ4	J	614	636	Right-handed alpha
Helix 86	AJ5	J	649	670	Right-handed alpha
Helix 87	AJ6	J	674	703	Right-handed alpha
Helix 88	AJ7	J	720	728	Right-handed alpha
Helix 89	AJ8	J	768	775	Right-handed alpha
Helix 90	AJ9	J	776	804	Right-handed alpha
Helix 91	AK1	J	834	840	Right-handed alpha
Helix 92	AK2	J	865	876	Right-handed alpha
Helix 93	AK3	J	884	888	Right-handed 310
Helix 94	AK4	J	895	900	Right-handed alpha
Helix 95	AK5	J	914	925	Right-handed alpha
Helix 96	AK6	J	926	930	Right-handed 310
Helix 97	AK7	J	1068	1073	Right-handed alpha
Helix 98	AK8	J	1137	1147	Right-handed alpha
Helix 99	AK9	J	1216	1225	Right-handed alpha
Helix 100	AL1	J	1225	1244	Right-handed alpha
Helix 101	AL2	J	1250	1261	Right-handed alpha
Helix 102	AL3	J	1282	1295	Right-handed alpha
Helix 103	AL4	J	1308	1315	Right-handed alpha
Helix 104	AL5	J	1318	1325	Right-handed alpha
Helix 105	AL6	J	1327	1339	Right-handed alpha
Helix 106	AL7	J	1348	1354	Right-handed alpha
Helix 107	AL8	J	1362	1373	Right-handed alpha
Helix 108	AL9	K	6	13	Right-handed alpha
Helix 109	AM1	K	17	32	Right-handed alpha
Helix 110	AM2	K	45	57	Right-handed alpha
Helix 111	AM3	K	60	71	Right-handed alpha

There are 51 sheets in PDB entry 8SZW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	23	25	first strand
Strand 2	G	198	207	anti-parallel
Strand 3	G	180	190	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	53	first strand
Strand 2	G	149	150	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	105	first strand
Strand 2	G	139	147	anti-parallel
Strand 3	G	56	61	anti-parallel
Strand 4	G	170	172	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	91	first strand
Strand 2	G	122	123	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	111	first strand
Strand 2	G	129	133	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	13	17	first strand
Strand 2	H	23	31	anti-parallel
Strand 3	H	199	207	anti-parallel
Strand 4	H	180	183	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	13	17	first strand
Strand 2	H	23	31	anti-parallel
Strand 3	H	199	207	anti-parallel
Strand 4	H	186	189	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	101	first strand
Strand 2	H	142	149	anti-parallel
Strand 3	H	53	61	anti-parallel
Strand 4	H	171	172	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	92	first strand
Strand 2	H	121	123	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	104	105	first strand
Strand 2	H	139	140	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	110	111	first strand
Strand 2	H	129	131	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	175	176	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	13	14	first strand
Strand 2	I	1182	1183	parallel
Strand 3	I	700	701	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	66	75	anti-parallel
Strand 3	I	93	104	anti-parallel
Strand 4	I	116	128	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	137	first strand
Strand 2	I	142	145	anti-parallel
Strand 3	I	512	514	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	147	148	first strand
Strand 2	I	530	531	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	158	first strand
Strand 2	I	173	177	anti-parallel
Strand 3	I	184	187	anti-parallel
Strand 4	I	195	197	anti-parallel
Strand 5	I	204	205	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	227	230	first strand
Strand 2	I	333	336	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	238	240	first strand
Strand 2	I	284	286	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	255	257	first strand
Strand 2	I	260	263	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	302	first strand
Strand 2	I	309	311	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	599	606	first strand
Strand 2	I	589	594	anti-parallel
Strand 3	I	652	653	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	633	637	first strand
Strand 2	I	642	646	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	748	752	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	722	728	anti-parallel
Strand 4	I	776	777	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	757	758	first strand
Strand 2	I	764	765	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	768	769	first strand
Strand 2	I	784	785	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	789	790	first strand
Strand 2	I	793	794	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	798	803	first strand
Strand 2	I	1225	1232	anti-parallel
Strand 3	I	1209	1210	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1065	1067	first strand
Strand 2	I	1073	1080	anti-parallel
Strand 3	I	816	819	parallel
Strand 4	I	1096	1097	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	841	first strand
Strand 2	I	1046	1058	anti-parallel
Strand 3	I	926	935	anti-parallel
Strand 4	I	876	877	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	882	884	first strand
Strand 2	I	918	919	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	887	889	first strand
Strand 2	I	913	915	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1087	1088	first strand
Strand 2	I	1212	1213	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1244	1246	first strand
Strand 2	J	350	353	anti-parallel
Strand 3	J	466	469	anti-parallel
Strand 4	J	421	425	anti-parallel
Strand 5	J	434	437	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1268	1269	first strand
Strand 2	J	346	347	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1340	first strand
Strand 2	J	19	24	anti-parallel
Strand 3	J	1341	1342	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	103	112	first strand
Strand 2	J	238	244	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	159	160	first strand
Strand 2	J	144	146	anti-parallel
Strand 3	J	178	179	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	254	255	first strand
Strand 2	J	259	260	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	355	356	first strand
Strand 2	J	447	448	parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	367	369	first strand
Strand 2	J	440	442	parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	526	527	first strand
Strand 2	J	547	556	parallel
Strand 3	J	564	573	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	706	707	first strand
Strand 2	J	714	715	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	820	822	first strand
Strand 2	J	880	882	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	825	826	first strand
Strand 2	J	831	833	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	991	996	first strand
Strand 2	J	981	985	anti-parallel
Strand 3	J	956	961	anti-parallel
Strand 4	J	1010	1011	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	965	967	first strand
Strand 2	J	973	975	anti-parallel
Strand 3	J	1002	1003	anti-parallel
Strand 4	J	1018	1019	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1080	1081	first strand
Strand 2	J	1033	1035	anti-parallel
Strand 3	J	1114	1115	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1049	1050	first strand
Strand 2	J	1057	1060	anti-parallel
Strand 3	J	1106	1107	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1162	1165	first strand
Strand 2	J	1172	1178	anti-parallel
Strand 3	J	1187	1191	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1268	anti-parallel
Strand 3	J	1301	1304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8SZW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8SZW