Analysis of interatomic Contacts of Structural Units in PDB entry:
8T0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T0F entry

There are 3 chains in PDB entry 8T0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 331TRP 485
B
 A 1 C 12
C
 G 1 T 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8T0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
334 350Right-handed alpha
Helix 2
AA2
A
352 361Right-handed alpha
Helix 3
AA3
A
364 374Right-handed alpha
Helix 4
AA4
A
384 397Right-handed alpha
Helix 5
AA5
A
398 405Right-handed alpha
Helix 6
AA6
A
434 448Right-handed alpha
Helix 7
AA7
A
452 464Right-handed alpha
Helix 8
AA8
A
466 482Right-handed alpha
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There are no sheets in PDB entry 8T0F
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il