Analysis of interatomic Contacts of Structural Units in PDB entry:
8T0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T0P entry

There are 3 chains in PDB entry 8T0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 125LYS 231
A
 SER 124LEU 275
C
 GLN 32LYS 49
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8T0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
128 149Right-handed alpha
Helix 2
AA2
B
149 160Right-handed alpha
Helix 3
AA3
B
164 231Right-handed alpha
Helix 4
AA4
A
129 142Right-handed alpha
Helix 5
AA5
A
145 149Right-handed 310
Helix 6
AA6
A
155 181Right-handed alpha
Helix 7
AA7
A
181 189Right-handed alpha
Helix 8
AA8
A
192 220Right-handed alpha
Helix 9
AA9
A
228 232Right-handed 310
Helix 10
AB1
A
233 274Right-handed alpha
Helix 11
AB2
C
33 48Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8T0P.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
223 224anti-parallel
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