Analysis of interatomic Contacts of Structural Units in PDB entry:
8T0Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T0Y entry

There are 4 chains in PDB entry 8T0Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ILE 387PHE 712
A
 LEU 384PHE 712
D
 LEU 384PHE 712
C
 ILE 387PHE 712
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8T0Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
394 401Right-handed alpha
Helix 2
AA2
B
410 414Right-handed 310
Helix 3
AA3
B
415 430Right-handed alpha
Helix 4
AA4
B
430 454Right-handed alpha
Helix 5
AA5
B
469 500Right-handed alpha
Helix 6
AA6
B
510 532Right-handed alpha
Helix 7
AA7
B
536 551Right-handed alpha
Helix 8
AA8
B
552 557Right-handed 310
Helix 9
AA9
B
559 599Right-handed alpha
Helix 10
AB1
B
629 642Right-handed alpha
Helix 11
AB2
B
655 671Right-handed alpha
Helix 12
AB3
B
673 689Right-handed alpha
Helix 13
AB4
B
689 711Right-handed alpha
Helix 14
AB5
A
394 401Right-handed alpha
Helix 15
AB6
A
410 414Right-handed 310
Helix 16
AB7
A
415 429Right-handed alpha
Helix 17
AB8
A
429 454Right-handed alpha
Helix 18
AB9
A
468 500Right-handed alpha
Helix 19
AC1
A
510 532Right-handed alpha
Helix 20
AC2
A
535 552Right-handed alpha
Helix 21
AC3
A
553 557Right-handed 310
Helix 22
AC4
A
559 599Right-handed alpha
Helix 23
AC5
A
602 628Right-handed 310
Helix 24
AC6
A
629 640Right-handed alpha
Helix 25
AC7
A
641 643Right-handed 310
Helix 26
AC8
A
655 670Right-handed alpha
Helix 27
AC9
A
673 689Right-handed alpha
Helix 28
AD1
A
689 712Right-handed alpha
Helix 29
AD2
D
394 402Right-handed alpha
Helix 30
AD3
D
410 414Right-handed 310
Helix 31
AD4
D
415 429Right-handed alpha
Helix 32
AD5
D
429 454Right-handed alpha
Helix 33
AD6
D
468 500Right-handed alpha
Helix 34
AD7
D
510 532Right-handed alpha
Helix 35
AD8
D
535 551Right-handed alpha
Helix 36
AD9
D
552 557Right-handed 310
Helix 37
AE1
D
559 599Right-handed alpha
Helix 38
AE2
D
602 628Right-handed 310
Helix 39
AE3
D
629 642Right-handed alpha
Helix 40
AE4
D
655 671Right-handed alpha
Helix 41
AE5
D
673 689Right-handed alpha
Helix 42
AE6
D
689 712Right-handed alpha
Helix 43
AE7
C
394 401Right-handed alpha
Helix 44
AE8
C
408 414Right-handed 310
Helix 45
AE9
C
415 450Right-handed alpha
Helix 46
AF1
C
450 455Right-handed alpha
Helix 47
AF2
C
468 500Right-handed alpha
Helix 48
AF3
C
510 532Right-handed alpha
Helix 49
AF4
C
536 556Right-handed alpha
Helix 50
AF5
C
559 599Right-handed alpha
Helix 51
AF6
C
629 642Right-handed alpha
Helix 52
AF7
C
655 671Right-handed alpha
Helix 53
AF8
C
673 689Right-handed alpha
Helix 54
AF9
C
689 712Right-handed alpha
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There are no sheets in PDB entry 8T0Y
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il