Analysis of interatomic Contacts of Structural Units in PDB entry:
8T0Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8T0Z entry

There are 12 chains in PDB entry 8T0Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 69	ARG 477
B	LEU 69	ARG 477
C	LEU 69	ARG 477
D	LEU 69	ARG 477
E	LEU 69	ARG 477
G	LEU 69	ARG 477
I	LEU 69	ARG 477
K	LEU 69	ARG 477
F	LEU 69	ARG 477
H	LEU 69	ARG 477
J	LEU 69	ARG 477
L	LEU 69	ARG 477

There are230 helices in PDB entry 8T0Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	72	81	Right-handed alpha
Helix 2	AA2	A	88	94	Right-handed alpha
Helix 3	AA3	A	96	100	Right-handed 310
Helix 4	AA4	A	105	107	Right-handed 310
Helix 5	AA5	A	108	118	Right-handed alpha
Helix 6	AA6	A	129	137	Right-handed alpha
Helix 7	AA7	A	140	149	Right-handed alpha
Helix 8	AA8	A	156	173	Right-handed alpha
Helix 9	AA9	A	185	189	Right-handed 310
Helix 10	AB1	A	221	239	Right-handed alpha
Helix 11	AB2	A	267	277	Right-handed alpha
Helix 12	AB3	A	283	299	Right-handed alpha
Helix 13	AB4	A	307	313	Right-handed alpha
Helix 14	AB5	A	319	332	Right-handed alpha
Helix 15	AB6	A	339	352	Right-handed alpha
Helix 16	AB7	A	356	363	Right-handed alpha
Helix 17	AB8	A	382	397	Right-handed alpha
Helix 18	AB9	A	398	400	Right-handed 310
Helix 19	AC1	A	401	409	Right-handed alpha
Helix 20	AC2	A	444	459	Right-handed alpha
Helix 21	AC3	B	72	81	Right-handed alpha
Helix 22	AC4	B	88	94	Right-handed alpha
Helix 23	AC5	B	96	100	Right-handed 310
Helix 24	AC6	B	108	119	Right-handed alpha
Helix 25	AC7	B	129	136	Right-handed alpha
Helix 26	AC8	B	141	149	Right-handed alpha
Helix 27	AC9	B	156	173	Right-handed alpha
Helix 28	AD1	B	221	234	Right-handed alpha
Helix 29	AD2	B	234	239	Right-handed alpha
Helix 30	AD3	B	267	277	Right-handed alpha
Helix 31	AD4	B	283	299	Right-handed alpha
Helix 32	AD5	B	307	313	Right-handed alpha
Helix 33	AD6	B	318	331	Right-handed alpha
Helix 34	AD7	B	339	353	Right-handed alpha
Helix 35	AD8	B	356	363	Right-handed alpha
Helix 36	AD9	B	382	397	Right-handed alpha
Helix 37	AE1	B	398	400	Right-handed 310
Helix 38	AE2	B	401	409	Right-handed alpha
Helix 39	AE3	B	444	459	Right-handed alpha
Helix 40	AE4	C	75	82	Right-handed alpha
Helix 41	AE5	C	88	98	Right-handed alpha
Helix 42	AE6	C	108	121	Right-handed alpha
Helix 43	AE7	C	129	137	Right-handed alpha
Helix 44	AE8	C	140	149	Right-handed alpha
Helix 45	AE9	C	156	173	Right-handed alpha
Helix 46	AF1	C	183	187	Right-handed 310
Helix 47	AF2	C	221	234	Right-handed alpha
Helix 48	AF3	C	234	239	Right-handed alpha
Helix 49	AF4	C	267	275	Right-handed alpha
Helix 50	AF5	C	283	299	Right-handed alpha
Helix 51	AF6	C	307	318	Right-handed alpha
Helix 52	AF7	C	318	331	Right-handed alpha
Helix 53	AF8	C	339	352	Right-handed alpha
Helix 54	AF9	C	356	369	Right-handed alpha
Helix 55	AG1	C	382	397	Right-handed alpha
Helix 56	AG2	C	398	403	Right-handed 310
Helix 57	AG3	C	444	459	Right-handed alpha
Helix 58	AG4	D	71	82	Right-handed alpha
Helix 59	AG5	D	89	96	Right-handed alpha
Helix 60	AG6	D	105	107	Right-handed 310
Helix 61	AG7	D	108	120	Right-handed alpha
Helix 62	AG8	D	129	138	Right-handed alpha
Helix 63	AG9	D	140	149	Right-handed alpha
Helix 64	AH1	D	156	173	Right-handed alpha
Helix 65	AH2	D	185	189	Right-handed 310
Helix 66	AH3	D	220	234	Right-handed alpha
Helix 67	AH4	D	234	240	Right-handed alpha
Helix 68	AH5	D	267	277	Right-handed alpha
Helix 69	AH6	D	283	299	Right-handed alpha
Helix 70	AH7	D	307	318	Right-handed alpha
Helix 71	AH8	D	318	331	Right-handed alpha
Helix 72	AH9	D	339	352	Right-handed alpha
Helix 73	AI1	D	356	369	Right-handed alpha
Helix 74	AI2	D	382	397	Right-handed alpha
Helix 75	AI3	D	398	403	Right-handed 310
Helix 76	AI4	D	444	459	Right-handed alpha
Helix 77	AI5	E	72	81	Right-handed alpha
Helix 78	AI6	E	88	94	Right-handed alpha
Helix 79	AI7	E	96	100	Right-handed 310
Helix 80	AI8	E	105	107	Right-handed 310
Helix 81	AI9	E	108	118	Right-handed alpha
Helix 82	AJ1	E	129	137	Right-handed alpha
Helix 83	AJ2	E	140	149	Right-handed alpha
Helix 84	AJ3	E	156	173	Right-handed alpha
Helix 85	AJ4	E	185	189	Right-handed 310
Helix 86	AJ5	E	221	239	Right-handed alpha
Helix 87	AJ6	E	267	277	Right-handed alpha
Helix 88	AJ7	E	283	299	Right-handed alpha
Helix 89	AJ8	E	307	313	Right-handed alpha
Helix 90	AJ9	E	319	332	Right-handed alpha
Helix 91	AK1	E	339	352	Right-handed alpha
Helix 92	AK2	E	356	363	Right-handed alpha
Helix 93	AK3	E	382	397	Right-handed alpha
Helix 94	AK4	E	398	400	Right-handed 310
Helix 95	AK5	E	401	409	Right-handed alpha
Helix 96	AK6	E	444	459	Right-handed alpha
Helix 97	AK7	G	72	81	Right-handed alpha
Helix 98	AK8	G	88	94	Right-handed alpha
Helix 99	AK9	G	105	119	Right-handed alpha
Helix 100	AL1	G	129	136	Right-handed alpha
Helix 101	AL2	G	141	149	Right-handed alpha
Helix 102	AL3	G	156	172	Right-handed alpha
Helix 103	AL4	G	221	234	Right-handed alpha
Helix 104	AL5	G	234	239	Right-handed alpha
Helix 105	AL6	G	267	277	Right-handed alpha
Helix 106	AL7	G	283	299	Right-handed alpha
Helix 107	AL8	G	307	313	Right-handed alpha
Helix 108	AL9	G	318	331	Right-handed alpha
Helix 109	AM1	G	339	352	Right-handed alpha
Helix 110	AM2	G	356	363	Right-handed alpha
Helix 111	AM3	G	382	397	Right-handed alpha
Helix 112	AM4	G	398	400	Right-handed 310
Helix 113	AM5	G	401	409	Right-handed alpha
Helix 114	AM6	G	444	459	Right-handed alpha
Helix 115	AM7	I	74	82	Right-handed alpha
Helix 116	AM8	I	88	98	Right-handed alpha
Helix 117	AM9	I	105	107	Right-handed 310
Helix 118	AN1	I	108	121	Right-handed alpha
Helix 119	AN2	I	129	137	Right-handed alpha
Helix 120	AN3	I	140	148	Right-handed alpha
Helix 121	AN4	I	157	173	Right-handed alpha
Helix 122	AN5	I	185	189	Right-handed 310
Helix 123	AN6	I	220	234	Right-handed alpha
Helix 124	AN7	I	234	239	Right-handed alpha
Helix 125	AN8	I	267	278	Right-handed alpha
Helix 126	AN9	I	283	299	Right-handed alpha
Helix 127	AO1	I	307	318	Right-handed alpha
Helix 128	AO2	I	318	331	Right-handed alpha
Helix 129	AO3	I	339	352	Right-handed alpha
Helix 130	AO4	I	356	369	Right-handed alpha
Helix 131	AO5	I	382	397	Right-handed alpha
Helix 132	AO6	I	398	403	Right-handed 310
Helix 133	AO7	I	444	459	Right-handed alpha
Helix 134	AO8	K	72	82	Right-handed alpha
Helix 135	AO9	K	88	98	Right-handed alpha
Helix 136	AP1	K	105	107	Right-handed 310
Helix 137	AP2	K	108	120	Right-handed alpha
Helix 138	AP3	K	129	138	Right-handed alpha
Helix 139	AP4	K	140	149	Right-handed alpha
Helix 140	AP5	K	156	172	Right-handed alpha
Helix 141	AP6	K	184	189	Right-handed 310
Helix 142	AP7	K	221	234	Right-handed alpha
Helix 143	AP8	K	234	239	Right-handed alpha
Helix 144	AP9	K	267	277	Right-handed alpha
Helix 145	AQ1	K	283	299	Right-handed alpha
Helix 146	AQ2	K	307	318	Right-handed alpha
Helix 147	AQ3	K	318	331	Right-handed alpha
Helix 148	AQ4	K	339	352	Right-handed alpha
Helix 149	AQ5	K	356	370	Right-handed alpha
Helix 150	AQ6	K	382	397	Right-handed alpha
Helix 151	AQ7	K	398	403	Right-handed 310
Helix 152	AQ8	K	444	459	Right-handed alpha
Helix 153	AQ9	F	72	81	Right-handed alpha
Helix 154	AR1	F	89	94	Right-handed alpha
Helix 155	AR2	F	95	100	Right-handed 310
Helix 156	AR3	F	108	119	Right-handed alpha
Helix 157	AR4	F	129	137	Right-handed alpha
Helix 158	AR5	F	140	149	Right-handed alpha
Helix 159	AR6	F	156	172	Right-handed alpha
Helix 160	AR7	F	183	188	Right-handed alpha
Helix 161	AR8	F	220	234	Right-handed alpha
Helix 162	AR9	F	234	239	Right-handed alpha
Helix 163	AS1	F	267	277	Right-handed alpha
Helix 164	AS2	F	283	300	Right-handed alpha
Helix 165	AS3	F	307	313	Right-handed alpha
Helix 166	AS4	F	319	331	Right-handed alpha
Helix 167	AS5	F	339	353	Right-handed alpha
Helix 168	AS6	F	356	363	Right-handed alpha
Helix 169	AS7	F	382	397	Right-handed alpha
Helix 170	AS8	F	398	400	Right-handed 310
Helix 171	AS9	F	401	409	Right-handed alpha
Helix 172	AT1	F	444	457	Right-handed alpha
Helix 173	AT2	H	72	81	Right-handed alpha
Helix 174	AT3	H	88	94	Right-handed alpha
Helix 175	AT4	H	96	100	Right-handed 310
Helix 176	AT5	H	105	107	Right-handed 310
Helix 177	AT6	H	108	119	Right-handed alpha
Helix 178	AT7	H	129	135	Right-handed alpha
Helix 179	AT8	H	136	138	Right-handed 310
Helix 180	AT9	H	141	149	Right-handed alpha
Helix 181	AU1	H	156	173	Right-handed alpha
Helix 182	AU2	H	183	188	Right-handed alpha
Helix 183	AU3	H	220	234	Right-handed alpha
Helix 184	AU4	H	234	239	Right-handed alpha
Helix 185	AU5	H	267	278	Right-handed alpha
Helix 186	AU6	H	283	299	Right-handed alpha
Helix 187	AU7	H	307	313	Right-handed alpha
Helix 188	AU8	H	318	331	Right-handed alpha
Helix 189	AU9	H	339	353	Right-handed alpha
Helix 190	AV1	H	356	363	Right-handed alpha
Helix 191	AV2	H	382	397	Right-handed alpha
Helix 192	AV3	H	398	400	Right-handed 310
Helix 193	AV4	H	401	409	Right-handed alpha
Helix 194	AV5	H	444	459	Right-handed alpha
Helix 195	AV6	J	75	82	Right-handed alpha
Helix 196	AV7	J	88	98	Right-handed alpha
Helix 197	AV8	J	108	121	Right-handed alpha
Helix 198	AV9	J	129	137	Right-handed alpha
Helix 199	AW1	J	140	149	Right-handed alpha
Helix 200	AW2	J	156	174	Right-handed alpha
Helix 201	AW3	J	183	189	Right-handed alpha
Helix 202	AW4	J	220	239	Right-handed alpha
Helix 203	AW5	J	267	277	Right-handed alpha
Helix 204	AW6	J	283	300	Right-handed alpha
Helix 205	AW7	J	307	318	Right-handed alpha
Helix 206	AW8	J	318	331	Right-handed alpha
Helix 207	AW9	J	339	352	Right-handed alpha
Helix 208	AX1	J	356	369	Right-handed alpha
Helix 209	AX2	J	382	397	Right-handed alpha
Helix 210	AX3	J	398	403	Right-handed 310
Helix 211	AX4	J	444	459	Right-handed alpha
Helix 212	AX5	L	72	82	Right-handed alpha
Helix 213	AX6	L	88	97	Right-handed alpha
Helix 214	AX7	L	105	107	Right-handed 310
Helix 215	AX8	L	108	119	Right-handed alpha
Helix 216	AX9	L	129	138	Right-handed alpha
Helix 217	AY1	L	140	149	Right-handed alpha
Helix 218	AY2	L	156	173	Right-handed alpha
Helix 219	AY3	L	183	189	Right-handed alpha
Helix 220	AY4	L	221	234	Right-handed alpha
Helix 221	AY5	L	234	240	Right-handed alpha
Helix 222	AY6	L	267	278	Right-handed alpha
Helix 223	AY7	L	283	299	Right-handed alpha
Helix 224	AY8	L	307	318	Right-handed alpha
Helix 225	AY9	L	318	331	Right-handed alpha
Helix 226	AZ1	L	339	352	Right-handed alpha
Helix 227	AZ2	L	356	369	Right-handed alpha
Helix 228	AZ3	L	382	397	Right-handed alpha
Helix 229	AZ4	L	398	403	Right-handed 310
Helix 230	AZ5	L	444	459	Right-handed alpha

There are 30 sheets in PDB entry 8T0Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	205	209	first strand
Strand 2	A	195	200	anti-parallel
Strand 3	A	429	431	anti-parallel
Strand 4	A	424	425	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	216	first strand
Strand 2	A	353	355	anti-parallel
Strand 3	A	305	306	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	420	421	first strand
Strand 2	A	433	434	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	209	first strand
Strand 2	B	195	200	anti-parallel
Strand 3	B	429	434	anti-parallel
Strand 4	B	421	425	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	215	216	first strand
Strand 2	B	354	355	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	179	first strand
Strand 2	C	437	438	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	205	209	first strand
Strand 2	C	195	200	anti-parallel
Strand 3	C	429	434	anti-parallel
Strand 4	C	421	425	anti-parallel
Strand 5	C	413	415	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	215	216	first strand
Strand 2	C	353	355	anti-parallel
Strand 3	C	305	306	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	205	209	first strand
Strand 2	D	195	200	anti-parallel
Strand 3	D	429	434	anti-parallel
Strand 4	D	420	425	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	215	216	first strand
Strand 2	D	353	355	anti-parallel
Strand 3	D	304	306	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	205	209	first strand
Strand 2	E	195	200	anti-parallel
Strand 3	E	429	431	anti-parallel
Strand 4	E	420	425	anti-parallel
Strand 5	E	413	414	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	205	209	first strand
Strand 2	E	195	200	anti-parallel
Strand 3	E	429	431	anti-parallel
Strand 4	E	420	425	anti-parallel
Strand 5	E	433	434	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	215	216	first strand
Strand 2	E	353	355	anti-parallel
Strand 3	E	305	306	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	205	209	first strand
Strand 2	G	195	200	anti-parallel
Strand 3	G	429	434	anti-parallel
Strand 4	G	420	425	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	215	216	first strand
Strand 2	G	354	355	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	178	179	first strand
Strand 2	I	437	438	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	205	209	first strand
Strand 2	I	195	200	anti-parallel
Strand 3	I	429	434	anti-parallel
Strand 4	I	421	425	anti-parallel
Strand 5	I	413	414	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	215	216	first strand
Strand 2	I	354	355	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	205	209	first strand
Strand 2	K	195	200	anti-parallel
Strand 3	K	429	434	anti-parallel
Strand 4	K	420	421	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	205	209	first strand
Strand 2	K	195	200	anti-parallel
Strand 3	K	429	434	anti-parallel
Strand 4	K	424	425	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	215	216	first strand
Strand 2	K	353	355	anti-parallel
Strand 3	K	304	306	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	205	209	first strand
Strand 2	F	195	199	anti-parallel
Strand 3	F	429	434	anti-parallel
Strand 4	F	420	421	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	205	209	first strand
Strand 2	F	195	199	anti-parallel
Strand 3	F	429	434	anti-parallel
Strand 4	F	424	425	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	215	216	first strand
Strand 2	F	354	355	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	205	209	first strand
Strand 2	H	195	200	anti-parallel
Strand 3	H	429	434	anti-parallel
Strand 4	H	424	425	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	215	216	first strand
Strand 2	H	354	355	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	205	209	first strand
Strand 2	J	195	200	anti-parallel
Strand 3	J	429	434	anti-parallel
Strand 4	J	423	425	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	215	216	first strand
Strand 2	J	353	355	anti-parallel
Strand 3	J	305	306	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	205	209	first strand
Strand 2	L	195	200	anti-parallel
Strand 3	L	429	434	anti-parallel
Strand 4	L	423	425	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	215	216	first strand
Strand 2	L	353	355	anti-parallel
Strand 3	L	305	306	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8T0Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
8T0Z