Analysis of interatomic Contacts of Structural Units in PDB entry:
8T14

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8T14 entry

There are 7 chains in PDB entry 8T14 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 417
G	MET 1	LEU 417
B	MET 1	LEU 417
C	MET 1	LEU 417
D	MET 1	LEU 417
E	MET 1	LEU 417
F	MET 1	LEU 417

There are112 helices in PDB entry 8T14. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	12	Right-handed alpha
Helix 2	AA2	A	13	47	Right-handed alpha
Helix 3	AA3	A	58	71	Right-handed alpha
Helix 4	AA4	A	87	89	Right-handed 310
Helix 5	AA5	A	144	161	Right-handed alpha
Helix 6	AA6	A	187	191	Right-handed 310
Helix 7	AA7	A	196	211	Right-handed alpha
Helix 8	AA8	A	211	218	Right-handed alpha
Helix 9	AA9	A	235	247	Right-handed alpha
Helix 10	AB1	A	262	272	Right-handed alpha
Helix 11	AB2	A	283	290	Right-handed alpha
Helix 12	AB3	A	309	317	Right-handed alpha
Helix 13	AB4	A	357	369	Right-handed alpha
Helix 14	AB5	A	373	388	Right-handed alpha
Helix 15	AB6	A	392	403	Right-handed alpha
Helix 16	AB7	A	406	413	Right-handed alpha
Helix 17	AB8	G	2	12	Right-handed alpha
Helix 18	AB9	G	13	47	Right-handed alpha
Helix 19	AC1	G	58	71	Right-handed alpha
Helix 20	AC2	G	87	89	Right-handed 310
Helix 21	AC3	G	144	161	Right-handed alpha
Helix 22	AC4	G	187	191	Right-handed 310
Helix 23	AC5	G	196	211	Right-handed alpha
Helix 24	AC6	G	211	218	Right-handed alpha
Helix 25	AC7	G	235	247	Right-handed alpha
Helix 26	AC8	G	262	272	Right-handed alpha
Helix 27	AC9	G	283	290	Right-handed alpha
Helix 28	AD1	G	309	317	Right-handed alpha
Helix 29	AD2	G	357	369	Right-handed alpha
Helix 30	AD3	G	373	388	Right-handed alpha
Helix 31	AD4	G	392	403	Right-handed alpha
Helix 32	AD5	G	406	413	Right-handed alpha
Helix 33	AD6	B	2	12	Right-handed alpha
Helix 34	AD7	B	13	47	Right-handed alpha
Helix 35	AD8	B	58	71	Right-handed alpha
Helix 36	AD9	B	87	89	Right-handed 310
Helix 37	AE1	B	144	161	Right-handed alpha
Helix 38	AE2	B	187	191	Right-handed 310
Helix 39	AE3	B	196	211	Right-handed alpha
Helix 40	AE4	B	211	218	Right-handed alpha
Helix 41	AE5	B	235	247	Right-handed alpha
Helix 42	AE6	B	262	272	Right-handed alpha
Helix 43	AE7	B	283	290	Right-handed alpha
Helix 44	AE8	B	309	317	Right-handed alpha
Helix 45	AE9	B	357	369	Right-handed alpha
Helix 46	AF1	B	373	388	Right-handed alpha
Helix 47	AF2	B	392	403	Right-handed alpha
Helix 48	AF3	B	406	413	Right-handed alpha
Helix 49	AF4	C	2	12	Right-handed alpha
Helix 50	AF5	C	13	47	Right-handed alpha
Helix 51	AF6	C	58	71	Right-handed alpha
Helix 52	AF7	C	87	89	Right-handed 310
Helix 53	AF8	C	144	161	Right-handed alpha
Helix 54	AF9	C	187	191	Right-handed 310
Helix 55	AG1	C	196	211	Right-handed alpha
Helix 56	AG2	C	211	218	Right-handed alpha
Helix 57	AG3	C	235	247	Right-handed alpha
Helix 58	AG4	C	262	272	Right-handed alpha
Helix 59	AG5	C	283	290	Right-handed alpha
Helix 60	AG6	C	309	317	Right-handed alpha
Helix 61	AG7	C	357	369	Right-handed alpha
Helix 62	AG8	C	373	388	Right-handed alpha
Helix 63	AG9	C	392	403	Right-handed alpha
Helix 64	AH1	C	406	413	Right-handed alpha
Helix 65	AH2	D	2	12	Right-handed alpha
Helix 66	AH3	D	13	47	Right-handed alpha
Helix 67	AH4	D	58	71	Right-handed alpha
Helix 68	AH5	D	87	89	Right-handed 310
Helix 69	AH6	D	144	161	Right-handed alpha
Helix 70	AH7	D	187	191	Right-handed 310
Helix 71	AH8	D	196	211	Right-handed alpha
Helix 72	AH9	D	211	218	Right-handed alpha
Helix 73	AI1	D	235	247	Right-handed alpha
Helix 74	AI2	D	262	272	Right-handed alpha
Helix 75	AI3	D	283	290	Right-handed alpha
Helix 76	AI4	D	309	317	Right-handed alpha
Helix 77	AI5	D	357	369	Right-handed alpha
Helix 78	AI6	D	373	388	Right-handed alpha
Helix 79	AI7	D	392	403	Right-handed alpha
Helix 80	AI8	D	406	413	Right-handed alpha
Helix 81	AI9	E	2	12	Right-handed alpha
Helix 82	AJ1	E	13	47	Right-handed alpha
Helix 83	AJ2	E	58	71	Right-handed alpha
Helix 84	AJ3	E	87	89	Right-handed 310
Helix 85	AJ4	E	144	161	Right-handed alpha
Helix 86	AJ5	E	187	191	Right-handed 310
Helix 87	AJ6	E	196	211	Right-handed alpha
Helix 88	AJ7	E	211	218	Right-handed alpha
Helix 89	AJ8	E	235	247	Right-handed alpha
Helix 90	AJ9	E	262	272	Right-handed alpha
Helix 91	AK1	E	283	290	Right-handed alpha
Helix 92	AK2	E	309	317	Right-handed alpha
Helix 93	AK3	E	357	369	Right-handed alpha
Helix 94	AK4	E	373	388	Right-handed alpha
Helix 95	AK5	E	392	403	Right-handed alpha
Helix 96	AK6	E	406	413	Right-handed alpha
Helix 97	AK7	F	2	12	Right-handed alpha
Helix 98	AK8	F	13	47	Right-handed alpha
Helix 99	AK9	F	58	71	Right-handed alpha
Helix 100	AL1	F	87	89	Right-handed 310
Helix 101	AL2	F	144	161	Right-handed alpha
Helix 102	AL3	F	187	191	Right-handed 310
Helix 103	AL4	F	196	211	Right-handed alpha
Helix 104	AL5	F	211	218	Right-handed alpha
Helix 105	AL6	F	235	247	Right-handed alpha
Helix 106	AL7	F	262	272	Right-handed alpha
Helix 107	AL8	F	283	290	Right-handed alpha
Helix 108	AL9	F	309	317	Right-handed alpha
Helix 109	AM1	F	357	369	Right-handed alpha
Helix 110	AM2	F	373	388	Right-handed alpha
Helix 111	AM3	F	392	403	Right-handed alpha
Helix 112	AM4	F	406	413	Right-handed alpha

There are 21 sheets in PDB entry 8T14. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	108	first strand
Strand 2	A	111	119	anti-parallel
Strand 3	A	133	140	anti-parallel
Strand 4	A	48	54	anti-parallel
Strand 5	G	76	85	parallel
Strand 6	G	91	99	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	99	first strand
Strand 2	A	76	85	anti-parallel
Strand 3	B	48	54	parallel
Strand 4	B	133	140	anti-parallel
Strand 5	B	111	119	anti-parallel
Strand 6	B	102	108	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	165	166	first strand
Strand 2	A	183	184	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	178	first strand
Strand 2	A	168	172	anti-parallel
Strand 3	A	250	255	parallel
Strand 4	A	277	282	parallel
Strand 5	A	325	331	parallel
Strand 6	A	223	229	parallel
Strand 7	A	347	352	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	102	108	first strand
Strand 2	G	111	119	anti-parallel
Strand 3	G	133	140	anti-parallel
Strand 4	G	48	54	anti-parallel
Strand 5	F	76	85	parallel
Strand 6	F	91	99	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	165	166	first strand
Strand 2	G	183	184	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	175	178	first strand
Strand 2	G	168	172	anti-parallel
Strand 3	G	250	255	parallel
Strand 4	G	277	282	parallel
Strand 5	G	325	331	parallel
Strand 6	G	223	229	parallel
Strand 7	G	347	352	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	99	first strand
Strand 2	B	76	85	anti-parallel
Strand 3	C	48	54	parallel
Strand 4	C	133	140	anti-parallel
Strand 5	C	111	119	anti-parallel
Strand 6	C	102	108	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	165	166	first strand
Strand 2	B	183	184	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	178	first strand
Strand 2	B	168	172	anti-parallel
Strand 3	B	250	255	parallel
Strand 4	B	277	282	parallel
Strand 5	B	325	331	parallel
Strand 6	B	223	229	parallel
Strand 7	B	347	352	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	99	first strand
Strand 2	C	76	85	anti-parallel
Strand 3	D	48	54	parallel
Strand 4	D	133	140	anti-parallel
Strand 5	D	111	119	anti-parallel
Strand 6	D	102	108	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	165	166	first strand
Strand 2	C	183	184	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	178	first strand
Strand 2	C	168	172	anti-parallel
Strand 3	C	250	255	parallel
Strand 4	C	277	282	parallel
Strand 5	C	325	331	parallel
Strand 6	C	223	229	parallel
Strand 7	C	347	352	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	99	first strand
Strand 2	D	76	85	anti-parallel
Strand 3	E	48	54	parallel
Strand 4	E	133	140	anti-parallel
Strand 5	E	111	119	anti-parallel
Strand 6	E	102	108	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	165	166	first strand
Strand 2	D	183	184	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	175	178	first strand
Strand 2	D	168	172	anti-parallel
Strand 3	D	250	255	parallel
Strand 4	D	277	282	parallel
Strand 5	D	325	331	parallel
Strand 6	D	223	229	parallel
Strand 7	D	347	352	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	91	99	first strand
Strand 2	E	76	85	anti-parallel
Strand 3	F	48	54	parallel
Strand 4	F	133	140	anti-parallel
Strand 5	F	111	119	anti-parallel
Strand 6	F	102	108	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	165	166	first strand
Strand 2	E	183	184	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	175	178	first strand
Strand 2	E	168	172	anti-parallel
Strand 3	E	250	255	parallel
Strand 4	E	277	282	parallel
Strand 5	E	325	331	parallel
Strand 6	E	223	229	parallel
Strand 7	E	347	352	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	165	166	first strand
Strand 2	F	183	184	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	175	178	first strand
Strand 2	F	168	172	anti-parallel
Strand 3	F	250	255	parallel
Strand 4	F	277	282	parallel
Strand 5	F	325	331	parallel
Strand 6	F	223	229	parallel
Strand 7	F	347	352	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8T14

Analysis of interatomic Contacts of Structural Units in PDB entry:
8T14