Analysis of interatomic Contacts of Structural Units in PDB entry:
8T1E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T1E entry

There are 4 chains in PDB entry 8T1E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 148TRP 788
B
 VAL 148TRP 788
C
 VAL 148TRP 788
D
 VAL 148TRP 788
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are128 helices in PDB entry 8T1E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
150 161Right-handed alpha
Helix 2
AA2
A
168 176Right-handed alpha
Helix 3
AA3
A
182 186Right-handed 310
Helix 4
AA4
A
193 201Right-handed alpha
Helix 5
AA5
A
208 221Right-handed alpha
Helix 6
AA6
A
222 227Right-handed alpha
Helix 7
AA7
A
240 248Right-handed alpha
Helix 8
AA8
A
250 260Right-handed alpha
Helix 9
AA9
A
270 274Right-handed 310
Helix 10
AB1
A
287 295Right-handed alpha
Helix 11
AB2
A
297 306Right-handed alpha
Helix 12
AB3
A
323 332Right-handed alpha
Helix 13
AB4
A
335 356Right-handed alpha
Helix 14
AB5
A
361 365Right-handed 310
Helix 15
AB6
A
372 381Right-handed alpha
Helix 16
AB7
A
382 391Right-handed alpha
Helix 17
AB8
A
397 401Right-handed 310
Helix 18
AB9
A
432 440Right-handed alpha
Helix 19
AC1
A
445 450Right-handed alpha
Helix 20
AC2
A
454 466Right-handed alpha
Helix 21
AC3
A
466 491Right-handed alpha
Helix 22
AC4
A
504 531Right-handed alpha
Helix 23
AC5
A
546 567Right-handed alpha
Helix 24
AC6
A
573 587Right-handed alpha
Helix 25
AC7
A
588 595Right-handed 310
Helix 26
AC8
A
596 613Right-handed alpha
Helix 27
AC9
A
614 634Right-handed alpha
Helix 28
AD1
A
664 678Right-handed alpha
Helix 29
AD2
A
691 707Right-handed alpha
Helix 30
AD3
A
709 747Right-handed alpha
Helix 31
AD4
A
749 756Right-handed alpha
Helix 32
AD5
A
768 770Right-handed 310
Helix 33
AD6
B
150 161Right-handed alpha
Helix 34
AD7
B
168 176Right-handed alpha
Helix 35
AD8
B
182 186Right-handed 310
Helix 36
AD9
B
193 201Right-handed alpha
Helix 37
AE1
B
208 221Right-handed alpha
Helix 38
AE2
B
222 227Right-handed alpha
Helix 39
AE3
B
240 248Right-handed alpha
Helix 40
AE4
B
250 260Right-handed alpha
Helix 41
AE5
B
270 274Right-handed 310
Helix 42
AE6
B
287 295Right-handed alpha
Helix 43
AE7
B
297 306Right-handed alpha
Helix 44
AE8
B
323 332Right-handed alpha
Helix 45
AE9
B
335 356Right-handed alpha
Helix 46
AF1
B
361 365Right-handed 310
Helix 47
AF2
B
372 381Right-handed alpha
Helix 48
AF3
B
382 391Right-handed alpha
Helix 49
AF4
B
397 401Right-handed 310
Helix 50
AF5
B
432 440Right-handed alpha
Helix 51
AF6
B
445 450Right-handed alpha
Helix 52
AF7
B
454 466Right-handed alpha
Helix 53
AF8
B
466 491Right-handed alpha
Helix 54
AF9
B
504 531Right-handed alpha
Helix 55
AG1
B
546 567Right-handed alpha
Helix 56
AG2
B
573 587Right-handed alpha
Helix 57
AG3
B
588 595Right-handed 310
Helix 58
AG4
B
596 613Right-handed alpha
Helix 59
AG5
B
614 634Right-handed alpha
Helix 60
AG6
B
664 678Right-handed alpha
Helix 61
AG7
B
691 707Right-handed alpha
Helix 62
AG8
B
709 747Right-handed alpha
Helix 63
AG9
B
749 756Right-handed alpha
Helix 64
AH1
B
768 770Right-handed 310
Helix 65
AH2
C
150 161Right-handed alpha
Helix 66
AH3
C
168 176Right-handed alpha
Helix 67
AH4
C
182 186Right-handed 310
Helix 68
AH5
C
193 201Right-handed alpha
Helix 69
AH6
C
208 221Right-handed alpha
Helix 70
AH7
C
222 227Right-handed alpha
Helix 71
AH8
C
240 248Right-handed alpha
Helix 72
AH9
C
250 260Right-handed alpha
Helix 73
AI1
C
270 274Right-handed 310
Helix 74
AI2
C
287 295Right-handed alpha
Helix 75
AI3
C
297 306Right-handed alpha
Helix 76
AI4
C
323 332Right-handed alpha
Helix 77
AI5
C
335 356Right-handed alpha
Helix 78
AI6
C
361 365Right-handed 310
Helix 79
AI7
C
372 381Right-handed alpha
Helix 80
AI8
C
382 391Right-handed alpha
Helix 81
AI9
C
397 401Right-handed 310
Helix 82
AJ1
C
432 440Right-handed alpha
Helix 83
AJ2
C
445 450Right-handed alpha
Helix 84
AJ3
C
454 466Right-handed alpha
Helix 85
AJ4
C
466 491Right-handed alpha
Helix 86
AJ5
C
504 531Right-handed alpha
Helix 87
AJ6
C
546 567Right-handed alpha
Helix 88
AJ7
C
573 587Right-handed alpha
Helix 89
AJ8
C
588 595Right-handed 310
Helix 90
AJ9
C
596 613Right-handed alpha
Helix 91
AK1
C
614 634Right-handed alpha
Helix 92
AK2
C
664 678Right-handed alpha
Helix 93
AK3
C
691 707Right-handed alpha
Helix 94
AK4
C
709 747Right-handed alpha
Helix 95
AK5
C
749 756Right-handed alpha
Helix 96
AK6
C
768 770Right-handed 310
Helix 97
AK7
D
150 161Right-handed alpha
Helix 98
AK8
D
168 176Right-handed alpha
Helix 99
AK9
D
182 186Right-handed 310
Helix 100
AL1
D
193 201Right-handed alpha
Helix 101
AL2
D
208 221Right-handed alpha
Helix 102
AL3
D
222 227Right-handed alpha
Helix 103
AL4
D
240 248Right-handed alpha
Helix 104
AL5
D
250 260Right-handed alpha
Helix 105
AL6
D
270 274Right-handed 310
Helix 106
AL7
D
287 295Right-handed alpha
Helix 107
AL8
D
297 306Right-handed alpha
Helix 108
AL9
D
323 332Right-handed alpha
Helix 109
AM1
D
335 356Right-handed alpha
Helix 110
AM2
D
361 365Right-handed 310
Helix 111
AM3
D
372 381Right-handed alpha
Helix 112
AM4
D
382 391Right-handed alpha
Helix 113
AM5
D
397 401Right-handed 310
Helix 114
AM6
D
432 440Right-handed alpha
Helix 115
AM7
D
445 450Right-handed alpha
Helix 116
AM8
D
454 466Right-handed alpha
Helix 117
AM9
D
466 491Right-handed alpha
Helix 118
AN1
D
504 531Right-handed alpha
Helix 119
AN2
D
546 567Right-handed alpha
Helix 120
AN3
D
573 587Right-handed alpha
Helix 121
AN4
D
588 595Right-handed 310
Helix 122
AN5
D
596 613Right-handed alpha
Helix 123
AN6
D
614 634Right-handed alpha
Helix 124
AN7
D
664 678Right-handed alpha
Helix 125
AN8
D
691 707Right-handed alpha
Helix 126
AN9
D
709 747Right-handed alpha
Helix 127
AO1
D
749 756Right-handed alpha
Helix 128
AO2
D
768 770Right-handed 310
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There are 4 sheets in PDB entry 8T1E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 406first strand
Strand 2
A
418 420anti-parallel
Strand 3
A
772 779anti-parallel
Strand 4
A
760 766anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
405 406first strand
Strand 2
B
418 420anti-parallel
Strand 3
B
772 779anti-parallel
Strand 4
B
760 766anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
405 406first strand
Strand 2
C
418 420anti-parallel
Strand 3
C
772 779anti-parallel
Strand 4
C
760 766anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
405 406first strand
Strand 2
D
418 420anti-parallel
Strand 3
D
772 779anti-parallel
Strand 4
D
760 766anti-parallel
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