Analysis of interatomic Contacts of Structural Units in PDB entry:
8T1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T1H entry

There are 2 chains in PDB entry 8T1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TRP 736
B
 MET 1TRP 736
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 8T1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 18Right-handed alpha
Helix 2
AA2
A
37 47Right-handed alpha
Helix 3
AA3
A
71 73Right-handed 310
Helix 4
AA4
A
74 79Right-handed alpha
Helix 5
AA5
A
80 82Right-handed 310
Helix 6
AA6
A
103 119Right-handed alpha
Helix 7
AA7
A
161 174Right-handed alpha
Helix 8
AA8
A
194 204Right-handed alpha
Helix 9
AA9
A
218 223Right-handed 310
Helix 10
AB1
A
226 232Right-handed alpha
Helix 11
AB2
A
248 254Right-handed alpha
Helix 12
AB3
A
257 273Right-handed alpha
Helix 13
AB4
A
281 323Right-handed alpha
Helix 14
AB5
A
328 350Right-handed alpha
Helix 15
AB6
A
362 372Right-handed alpha
Helix 16
AB7
A
372 381Right-handed alpha
Helix 17
AB8
A
388 401Right-handed alpha
Helix 18
AB9
A
409 450Right-handed alpha
Helix 19
AC1
A
451 457Right-handed alpha
Helix 20
AC2
A
457 493Right-handed alpha
Helix 21
AC3
A
641 674Right-handed alpha
Helix 22
AC4
A
674 690Right-handed alpha
Helix 23
AC5
A
694 700Right-handed alpha
Helix 24
AC6
A
703 730Right-handed alpha
Helix 25
AC7
A
731 736Right-handed 310
Helix 26
AC8
B
1 2Right-handed 310
Helix 27
AC9
B
3 13Right-handed alpha
Helix 28
AD1
B
14 19Right-handed alpha
Helix 29
AD2
B
37 47Right-handed alpha
Helix 30
AD3
B
74 79Right-handed alpha
Helix 31
AD4
B
103 120Right-handed alpha
Helix 32
AD5
B
161 175Right-handed alpha
Helix 33
AD6
B
194 204Right-handed alpha
Helix 34
AD7
B
217 221Right-handed 310
Helix 35
AD8
B
226 232Right-handed alpha
Helix 36
AD9
B
248 254Right-handed alpha
Helix 37
AE1
B
257 273Right-handed alpha
Helix 38
AE2
B
281 324Right-handed alpha
Helix 39
AE3
B
328 349Right-handed alpha
Helix 40
AE4
B
362 372Right-handed alpha
Helix 41
AE5
B
372 381Right-handed alpha
Helix 42
AE6
B
388 401Right-handed alpha
Helix 43
AE7
B
409 423Right-handed alpha
Helix 44
AE8
B
424 449Right-handed alpha
Helix 45
AE9
B
451 457Right-handed alpha
Helix 46
AF1
B
457 493Right-handed alpha
Helix 47
AF2
B
641 674Right-handed alpha
Helix 48
AF3
B
674 691Right-handed alpha
Helix 49
AF4
B
695 700Right-handed alpha
Helix 50
AF5
B
703 728Right-handed alpha
Helix 51
AF6
B
732 736Right-handed 310
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There are 2 sheets in PDB entry 8T1H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 93first strand
Strand 2
A
130 136anti-parallel
Strand 3
A
63 69parallel
Strand 4
A
142 146anti-parallel
Strand 5
A
28 31parallel
Strand 6
A
180 186parallel
Strand 7
A
210 215parallel
Strand 8
A
241 243parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 92first strand
Strand 2
B
133 136anti-parallel
Strand 3
B
63 69parallel
Strand 4
B
142 146anti-parallel
Strand 5
B
27 31parallel
Strand 6
B
179 186parallel
Strand 7
B
210 215parallel
Strand 8
B
241 243parallel
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