Analysis of interatomic Contacts of Structural Units in PDB entry:
8T23


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T23 entry

There are 2 chains in PDB entry 8T23 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19ALA 614
B
 LEU 335LYS 528
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 8T23. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 53Right-handed alpha
Helix 2
AA2
A
61 66Right-handed alpha
Helix 3
AA3
A
66 83Right-handed alpha
Helix 4
AA4
A
90 102Right-handed alpha
Helix 5
AA5
A
109 129Right-handed alpha
Helix 6
AA6
A
144 148Right-handed 310
Helix 7
AA7
A
150 155Right-handed alpha
Helix 8
AA8
A
157 163Right-handed alpha
Helix 9
AA9
A
163 172Right-handed alpha
Helix 10
AB1
A
173 177Right-handed 310
Helix 11
AB2
A
182 187Right-handed alpha
Helix 12
AB3
A
199 204Right-handed alpha
Helix 13
AB4
A
219 223Right-handed 310
Helix 14
AB5
A
225 231Right-handed alpha
Helix 15
AB6
A
233 235Right-handed 310
Helix 16
AB7
A
236 248Right-handed alpha
Helix 17
AB8
A
249 252Right-handed 310
Helix 18
AB9
A
306 317Right-handed alpha
Helix 19
AC1
A
324 331Right-handed alpha
Helix 20
AC2
A
365 382Right-handed alpha
Helix 21
AC3
A
383 386Right-handed 310
Helix 22
AC4
A
389 393Right-handed 310
Helix 23
AC5
A
397 413Right-handed alpha
Helix 24
AC6
A
415 422Right-handed alpha
Helix 25
AC7
A
431 435Right-handed 310
Helix 26
AC8
A
446 452Right-handed 310
Helix 27
AC9
A
453 464Right-handed alpha
Helix 28
AD1
A
475 485Right-handed alpha
Helix 29
AD2
A
499 507Right-handed 310
Helix 30
AD3
A
519 523Right-handed 310
Helix 31
AD4
A
524 527Right-handed 310
Helix 32
AD5
A
528 533Right-handed alpha
Helix 33
AD6
A
547 555Right-handed alpha
Helix 34
AD7
A
565 575Right-handed alpha
Helix 35
AD8
A
585 587Right-handed 310
Helix 36
AD9
A
588 596Right-handed alpha
Helix 37
AE1
B
386 390Right-handed 310
Helix 38
AE2
B
405 410Right-handed 310
Helix 39
AE3
B
416 422Right-handed alpha
Helix 40
AE4
B
438 443Right-handed alpha
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There are 2 sheets in PDB entry 8T23. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 352first strand
Strand 2
A
355 357anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
396 403first strand
Strand 2
B
507 514anti-parallel
Strand 3
B
431 437anti-parallel
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