Analysis of interatomic Contacts of Structural Units in PDB entry:
8T2C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T2C entry

There are 6 chains in PDB entry 8T2C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2VAL 45
A
 ASP 47SER 307
B
 GLN 3VAL 45
B
 ASP 47SER 307
C
 MET 7ILE 10
D
 MET 7ILE 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8T2C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 13Right-handed 310
Helix 2
AA2
A
38 40Right-handed 310
Helix 3
AA3
A
45 60Right-handed alpha
Helix 4
AA4
A
75 89Right-handed alpha
Helix 5
AA5
A
101 111Right-handed alpha
Helix 6
AA6
A
119 121Right-handed 310
Helix 7
AA7
A
122 139Right-handed alpha
Helix 8
AA8
A
149 158Right-handed alpha
Helix 9
AA9
A
158 167Right-handed alpha
Helix 10
AB1
A
182 196Right-handed alpha
Helix 11
AB2
A
210 214Right-handed 310
Helix 12
AB3
A
246 262Right-handed alpha
Helix 13
AB4
A
266 284Right-handed alpha
Helix 14
AB5
A
296 301Right-handed 310
Helix 15
AB6
A
303 307Right-handed 310
Helix 16
AB7
B
8 13Right-handed 310
Helix 17
AB8
B
38 40Right-handed 310
Helix 18
AB9
B
45 61Right-handed alpha
Helix 19
AC1
B
75 89Right-handed alpha
Helix 20
AC2
B
101 111Right-handed alpha
Helix 21
AC3
B
119 121Right-handed 310
Helix 22
AC4
B
122 139Right-handed alpha
Helix 23
AC5
B
149 158Right-handed alpha
Helix 24
AC6
B
158 167Right-handed alpha
Helix 25
AC7
B
182 196Right-handed alpha
Helix 26
AC8
B
246 262Right-handed alpha
Helix 27
AC9
B
266 284Right-handed alpha
Helix 28
AD1
B
296 301Right-handed 310
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There are 4 sheets in PDB entry 8T2C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
31 36anti-parallel
Strand 3
A
288 293parallel
Strand 4
A
174 178parallel
Strand 5
A
200 206parallel
Strand 6
A
241 245parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
91 97parallel
Strand 3
A
114 118parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 20first strand
Strand 2
B
31 36anti-parallel
Strand 3
B
288 293parallel
Strand 4
B
174 178parallel
Strand 5
B
200 206parallel
Strand 6
B
241 245parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 72first strand
Strand 2
B
91 97parallel
Strand 3
B
114 118parallel
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