Analysis of interatomic Contacts of Structural Units in PDB entry:
8T50


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T50 entry

There are 4 chains in PDB entry 8T50 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASN 107ALA 635
B
 ASN 107ALA 635
A
 ASN 107ALA 635
D
 ASN 107ALA 635
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 8T50. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
107 115Right-handed alpha
Helix 2
AA2
C
116 130Right-handed alpha
Helix 3
AA3
C
141 165Right-handed alpha
Helix 4
AA4
C
173 195Right-handed alpha
Helix 5
AA5
C
210 221Right-handed alpha
Helix 6
AA6
C
221 229Right-handed alpha
Helix 7
AA7
C
231 242Right-handed alpha
Helix 8
AA8
C
253 259Right-handed alpha
Helix 9
AA9
C
260 262Right-handed 310
Helix 10
AB1
C
263 285Right-handed alpha
Helix 11
AB2
C
296 324Right-handed alpha
Helix 12
AB3
C
341 358Right-handed alpha
Helix 13
AB4
C
368 422Right-handed alpha
Helix 14
AB5
C
424 440Right-handed alpha
Helix 15
AB6
C
445 452Right-handed alpha
Helix 16
AB7
C
454 466Right-handed alpha
Helix 17
AB8
C
466 473Right-handed alpha
Helix 18
AB9
C
473 479Right-handed alpha
Helix 19
AC1
C
480 490Right-handed alpha
Helix 20
AC2
C
539 546Right-handed alpha
Helix 21
AC3
C
566 576Right-handed alpha
Helix 22
AC4
C
576 595Right-handed alpha
Helix 23
AC5
C
598 606Right-handed alpha
Helix 24
AC6
C
617 634Right-handed alpha
Helix 25
AC7
B
108 115Right-handed alpha
Helix 26
AC8
B
116 130Right-handed alpha
Helix 27
AC9
B
141 165Right-handed alpha
Helix 28
AD1
B
173 195Right-handed alpha
Helix 29
AD2
B
210 221Right-handed alpha
Helix 30
AD3
B
221 229Right-handed alpha
Helix 31
AD4
B
231 242Right-handed alpha
Helix 32
AD5
B
253 259Right-handed alpha
Helix 33
AD6
B
260 262Right-handed 310
Helix 34
AD7
B
263 285Right-handed alpha
Helix 35
AD8
B
296 324Right-handed alpha
Helix 36
AD9
B
341 357Right-handed alpha
Helix 37
AE1
B
368 422Right-handed alpha
Helix 38
AE2
B
424 439Right-handed alpha
Helix 39
AE3
B
445 452Right-handed alpha
Helix 40
AE4
B
454 466Right-handed alpha
Helix 41
AE5
B
466 473Right-handed alpha
Helix 42
AE6
B
473 479Right-handed alpha
Helix 43
AE7
B
480 490Right-handed alpha
Helix 44
AE8
B
539 546Right-handed alpha
Helix 45
AE9
B
566 576Right-handed alpha
Helix 46
AF1
B
576 595Right-handed alpha
Helix 47
AF2
B
598 606Right-handed alpha
Helix 48
AF3
B
617 634Right-handed alpha
Helix 49
AF4
A
108 115Right-handed alpha
Helix 50
AF5
A
116 130Right-handed alpha
Helix 51
AF6
A
141 165Right-handed alpha
Helix 52
AF7
A
173 195Right-handed alpha
Helix 53
AF8
A
210 221Right-handed alpha
Helix 54
AF9
A
221 229Right-handed alpha
Helix 55
AG1
A
231 242Right-handed alpha
Helix 56
AG2
A
253 259Right-handed alpha
Helix 57
AG3
A
260 262Right-handed 310
Helix 58
AG4
A
263 285Right-handed alpha
Helix 59
AG5
A
296 324Right-handed alpha
Helix 60
AG6
A
341 358Right-handed alpha
Helix 61
AG7
A
368 422Right-handed alpha
Helix 62
AG8
A
424 440Right-handed alpha
Helix 63
AG9
A
445 452Right-handed alpha
Helix 64
AH1
A
454 466Right-handed alpha
Helix 65
AH2
A
466 473Right-handed alpha
Helix 66
AH3
A
473 479Right-handed alpha
Helix 67
AH4
A
480 490Right-handed alpha
Helix 68
AH5
A
539 546Right-handed alpha
Helix 69
AH6
A
566 576Right-handed alpha
Helix 70
AH7
A
576 595Right-handed alpha
Helix 71
AH8
A
598 606Right-handed alpha
Helix 72
AH9
A
617 634Right-handed alpha
Helix 73
AI1
D
108 115Right-handed alpha
Helix 74
AI2
D
116 130Right-handed alpha
Helix 75
AI3
D
141 165Right-handed alpha
Helix 76
AI4
D
173 195Right-handed alpha
Helix 77
AI5
D
210 221Right-handed alpha
Helix 78
AI6
D
221 229Right-handed alpha
Helix 79
AI7
D
231 242Right-handed alpha
Helix 80
AI8
D
253 259Right-handed alpha
Helix 81
AI9
D
260 262Right-handed 310
Helix 82
AJ1
D
263 285Right-handed alpha
Helix 83
AJ2
D
296 324Right-handed alpha
Helix 84
AJ3
D
341 358Right-handed alpha
Helix 85
AJ4
D
368 422Right-handed alpha
Helix 86
AJ5
D
424 440Right-handed alpha
Helix 87
AJ6
D
445 452Right-handed alpha
Helix 88
AJ7
D
454 466Right-handed alpha
Helix 89
AJ8
D
466 473Right-handed alpha
Helix 90
AJ9
D
473 479Right-handed alpha
Helix 91
AK1
D
480 490Right-handed alpha
Helix 92
AK2
D
539 546Right-handed alpha
Helix 93
AK3
D
566 576Right-handed alpha
Helix 94
AK4
D
576 595Right-handed alpha
Helix 95
AK5
D
598 606Right-handed alpha
Helix 96
AK6
D
617 634Right-handed alpha
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There are 8 sheets in PDB entry 8T50. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
492 496first strand
Strand 2
C
559 565anti-parallel
Strand 3
C
511 517anti-parallel
Strand 4
C
536 538anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
501 503first strand
Strand 2
C
552 555anti-parallel
Strand 3
C
520 523anti-parallel
Strand 4
C
529 532anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
492 496first strand
Strand 2
B
559 565anti-parallel
Strand 3
B
511 517anti-parallel
Strand 4
B
536 538anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
501 503first strand
Strand 2
B
552 555anti-parallel
Strand 3
B
520 523anti-parallel
Strand 4
B
529 532anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 496first strand
Strand 2
A
559 565anti-parallel
Strand 3
A
511 517anti-parallel
Strand 4
A
536 538anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 503first strand
Strand 2
A
552 555anti-parallel
Strand 3
A
520 523anti-parallel
Strand 4
A
529 532anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
492 496first strand
Strand 2
D
559 565anti-parallel
Strand 3
D
511 517anti-parallel
Strand 4
D
536 538anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
501 503first strand
Strand 2
D
552 555anti-parallel
Strand 3
D
520 523anti-parallel
Strand 4
D
529 532anti-parallel
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