Analysis of interatomic Contacts of Structural Units in PDB entry:
8T56


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T56 entry

There are 10 chains in PDB entry 8T56 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LYS 718
B
 ALA 2LYS 718
C
 ALA 2TRP 36
D
 PHE 1TRP 36
E
 PHE 1TRP 36
F
 PHE 13ASP 37
G
 ALA 2TRP 36
H
 PHE 1TRP 36
I
 PHE 1TRP 36
J
 PHE 13ASP 37
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 8T56. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 29Right-handed alpha
Helix 2
AA2
A
30 33Right-handed 310
Helix 3
AA3
A
34 39Right-handed alpha
Helix 4
AA4
A
39 46Right-handed alpha
Helix 5
AA5
A
74 80Right-handed alpha
Helix 6
AA6
A
83 92Right-handed alpha
Helix 7
AA7
A
92 121Right-handed alpha
Helix 8
AA8
A
158 194Right-handed alpha
Helix 9
AA9
A
198 201Right-handed 310
Helix 10
AB1
A
216 229Right-handed alpha
Helix 11
AB2
A
242 265Right-handed alpha
Helix 12
AB3
A
291 315Right-handed alpha
Helix 13
AB4
A
329 338Right-handed alpha
Helix 14
AB5
A
355 359Right-handed 310
Helix 15
AB6
A
360 366Right-handed 310
Helix 16
AB7
A
367 369Right-handed 310
Helix 17
AB8
A
370 389Right-handed alpha
Helix 18
AB9
A
389 399Right-handed alpha
Helix 19
AC1
A
401 409Right-handed alpha
Helix 20
AC2
A
410 416Right-handed 310
Helix 21
AC3
A
418 438Right-handed alpha
Helix 22
AC4
A
440 452Right-handed alpha
Helix 23
AC5
A
456 476Right-handed alpha
Helix 24
AC6
A
476 487Right-handed alpha
Helix 25
AC7
A
509 511Right-handed 310
Helix 26
AC8
A
512 524Right-handed alpha
Helix 27
AC9
A
524 532Right-handed alpha
Helix 28
AD1
A
534 548Right-handed alpha
Helix 29
AD2
A
551 553Right-handed 310
Helix 30
AD3
A
554 559Right-handed alpha
Helix 31
AD4
A
565 584Right-handed alpha
Helix 32
AD5
A
587 589Right-handed 310
Helix 33
AD6
A
590 612Right-handed alpha
Helix 34
AD7
A
623 647Right-handed alpha
Helix 35
AD8
A
655 676Right-handed alpha
Helix 36
AD9
A
677 682Right-handed alpha
Helix 37
AE1
A
684 699Right-handed alpha
Helix 38
AE2
A
703 710Right-handed alpha
Helix 39
AE3
B
3 29Right-handed alpha
Helix 40
AE4
B
30 33Right-handed 310
Helix 41
AE5
B
34 39Right-handed alpha
Helix 42
AE6
B
39 46Right-handed alpha
Helix 43
AE7
B
74 80Right-handed alpha
Helix 44
AE8
B
83 92Right-handed alpha
Helix 45
AE9
B
92 121Right-handed alpha
Helix 46
AF1
B
158 194Right-handed alpha
Helix 47
AF2
B
198 201Right-handed 310
Helix 48
AF3
B
216 229Right-handed alpha
Helix 49
AF4
B
242 265Right-handed alpha
Helix 50
AF5
B
291 315Right-handed alpha
Helix 51
AF6
B
329 338Right-handed alpha
Helix 52
AF7
B
355 359Right-handed 310
Helix 53
AF8
B
360 366Right-handed 310
Helix 54
AF9
B
367 369Right-handed 310
Helix 55
AG1
B
370 389Right-handed alpha
Helix 56
AG2
B
389 399Right-handed alpha
Helix 57
AG3
B
401 409Right-handed alpha
Helix 58
AG4
B
410 416Right-handed 310
Helix 59
AG5
B
418 438Right-handed alpha
Helix 60
AG6
B
440 452Right-handed alpha
Helix 61
AG7
B
456 476Right-handed alpha
Helix 62
AG8
B
476 487Right-handed alpha
Helix 63
AG9
B
509 511Right-handed 310
Helix 64
AH1
B
512 524Right-handed alpha
Helix 65
AH2
B
524 532Right-handed alpha
Helix 66
AH3
B
534 548Right-handed alpha
Helix 67
AH4
B
551 553Right-handed 310
Helix 68
AH5
B
554 559Right-handed alpha
Helix 69
AH6
B
565 584Right-handed alpha
Helix 70
AH7
B
587 589Right-handed 310
Helix 71
AH8
B
590 612Right-handed alpha
Helix 72
AH9
B
623 647Right-handed alpha
Helix 73
AI1
B
655 676Right-handed alpha
Helix 74
AI2
B
677 682Right-handed alpha
Helix 75
AI3
B
684 699Right-handed alpha
Helix 76
AI4
B
703 710Right-handed alpha
Helix 77
AI5
C
3 34Right-handed alpha
Helix 78
AI6
D
2 16Right-handed alpha
Helix 79
AI7
D
16 34Right-handed alpha
Helix 80
AI8
E
2 15Right-handed alpha
Helix 81
AI9
E
16 34Right-handed alpha
Helix 82
AJ1
F
14 37Right-handed alpha
Helix 83
AJ2
G
3 34Right-handed alpha
Helix 84
AJ3
H
2 16Right-handed alpha
Helix 85
AJ4
H
16 34Right-handed alpha
Helix 86
AJ5
I
2 15Right-handed alpha
Helix 87
AJ6
I
16 34Right-handed alpha
Helix 88
AJ7
J
14 37Right-handed alpha
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There are 2 sheets in PDB entry 8T56. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 240first strand
Strand 2
A
319 327anti-parallel
Strand 3
A
203 207anti-parallel
Strand 4
A
349 352anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 240first strand
Strand 2
B
319 327anti-parallel
Strand 3
B
203 207anti-parallel
Strand 4
B
349 352anti-parallel
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