Analysis of interatomic Contacts of Structural Units in PDB entry:
8T57


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T57 entry

There are 2 chains in PDB entry 8T57 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2ALA 691
B
 LEU 2ALA 691
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 8T57. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 25Right-handed alpha
Helix 2
AA2
A
66 71Right-handed alpha
Helix 3
AA3
A
73 81Right-handed alpha
Helix 4
AA4
A
82 109Right-handed alpha
Helix 5
AA5
A
110 115Right-handed alpha
Helix 6
AA6
A
130 139Right-handed 310
Helix 7
AA7
A
145 182Right-handed alpha
Helix 8
AA8
A
185 188Right-handed 310
Helix 9
AA9
A
203 216Right-handed alpha
Helix 10
AB1
A
310 320Right-handed alpha
Helix 11
AB2
A
336 340Right-handed 310
Helix 12
AB3
A
341 347Right-handed 310
Helix 13
AB4
A
348 368Right-handed alpha
Helix 14
AB5
A
411 420Right-handed alpha
Helix 15
AB6
A
421 431Right-handed alpha
Helix 16
AB7
A
437 457Right-handed alpha
Helix 17
AB8
A
457 463Right-handed alpha
Helix 18
AB9
A
466 474Right-handed alpha
Helix 19
AC1
A
475 478Right-handed 310
Helix 20
AC2
A
479 486Right-handed alpha
Helix 21
AC3
A
488 490Right-handed 310
Helix 22
AC4
A
491 512Right-handed alpha
Helix 23
AC5
A
540 562Right-handed alpha
Helix 24
AC6
A
565 587Right-handed alpha
Helix 25
AC7
A
598 624Right-handed alpha
Helix 26
AC8
A
626 633Right-handed alpha
Helix 27
AC9
A
634 651Right-handed alpha
Helix 28
AD1
A
652 656Right-handed 310
Helix 29
AD2
A
659 674Right-handed alpha
Helix 30
AD3
A
675 684Right-handed alpha
Helix 31
AD4
B
3 25Right-handed alpha
Helix 32
AD5
B
66 71Right-handed alpha
Helix 33
AD6
B
73 81Right-handed alpha
Helix 34
AD7
B
82 109Right-handed alpha
Helix 35
AD8
B
110 115Right-handed alpha
Helix 36
AD9
B
130 139Right-handed 310
Helix 37
AE1
B
145 182Right-handed alpha
Helix 38
AE2
B
185 188Right-handed 310
Helix 39
AE3
B
203 216Right-handed alpha
Helix 40
AE4
B
310 320Right-handed alpha
Helix 41
AE5
B
336 340Right-handed 310
Helix 42
AE6
B
341 347Right-handed 310
Helix 43
AE7
B
348 368Right-handed alpha
Helix 44
AE8
B
411 420Right-handed alpha
Helix 45
AE9
B
421 431Right-handed alpha
Helix 46
AF1
B
437 457Right-handed alpha
Helix 47
AF2
B
457 463Right-handed alpha
Helix 48
AF3
B
466 474Right-handed alpha
Helix 49
AF4
B
475 478Right-handed 310
Helix 50
AF5
B
479 486Right-handed alpha
Helix 51
AF6
B
488 490Right-handed 310
Helix 52
AF7
B
491 512Right-handed alpha
Helix 53
AF8
B
540 562Right-handed alpha
Helix 54
AF9
B
565 587Right-handed alpha
Helix 55
AG1
B
598 624Right-handed alpha
Helix 56
AG2
B
626 633Right-handed alpha
Helix 57
AG3
B
634 651Right-handed alpha
Helix 58
AG4
B
652 656Right-handed 310
Helix 59
AG5
B
659 674Right-handed alpha
Helix 60
AG6
B
675 684Right-handed alpha
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There are 2 sheets in PDB entry 8T57. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 224first strand
Strand 2
A
303 308anti-parallel
Strand 3
A
190 194anti-parallel
Strand 4
A
330 333anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 224first strand
Strand 2
B
303 308anti-parallel
Strand 3
B
190 194anti-parallel
Strand 4
B
330 333anti-parallel
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