Analysis of interatomic Contacts of Structural Units in PDB entry:
8T66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T66 entry

There are 3 chains in PDB entry 8T66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ARG 51GLU 206
A
 LEU 49PRO 205
C
 A 0 A 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8T66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
77 88Right-handed alpha
Helix 2
AA2
B
100 113Right-handed alpha
Helix 3
AA3
B
129 147Right-handed alpha
Helix 4
AA4
B
160 175Right-handed alpha
Helix 5
AA5
B
194 197Right-handed 310
Helix 6
AA6
A
77 88Right-handed alpha
Helix 7
AA7
A
100 114Right-handed alpha
Helix 8
AA8
A
129 147Right-handed alpha
Helix 9
AA9
A
160 175Right-handed alpha
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There are 3 sheets in PDB entry 8T66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
198 203anti-parallel
Strand 3
B
177 182anti-parallel
Strand 4
B
152 155parallel
Strand 5
B
69 73parallel
Strand 6
B
91 97parallel
Strand 7
B
117 124parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
191 192anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 124first strand
Strand 2
A
91 97parallel
Strand 3
A
69 73parallel
Strand 4
A
152 155parallel
Strand 5
A
177 186parallel
Strand 6
A
191 203anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il