Analysis of interatomic Contacts of Structural Units in PDB entry:
8T6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T6L entry

There is 1 chain in PDB entry 8T6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11ALA 1780
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 8T6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 32Right-handed alpha
Helix 2
AA2
A
56 60Right-handed 310
Helix 3
AA3
A
66 70Right-handed 310
Helix 4
AA4
A
110 114Right-handed 310
Helix 5
AA5
A
119 131Right-handed alpha
Helix 6
AA6
A
131 149Right-handed alpha
Helix 7
AA7
A
155 157Right-handed 310
Helix 8
AA8
A
158 181Right-handed alpha
Helix 9
AA9
A
188 193Right-handed 310
Helix 10
AB1
A
194 210Right-handed alpha
Helix 11
AB2
A
216 227Right-handed 310
Helix 12
AB3
A
228 234Right-handed alpha
Helix 13
AB4
A
234 250Right-handed alpha
Helix 14
AB5
A
251 273Right-handed alpha
Helix 15
AB6
A
275 279Right-handed 310
Helix 16
AB7
A
304 311Right-handed alpha
Helix 17
AB8
A
349 353Right-handed 310
Helix 18
AB9
A
358 372Right-handed alpha
Helix 19
AC1
A
374 386Right-handed alpha
Helix 20
AC2
A
387 389Right-handed 310
Helix 21
AC3
A
390 401Right-handed alpha
Helix 22
AC4
A
402 435Right-handed alpha
Helix 23
AC5
A
701 717Right-handed alpha
Helix 24
AC6
A
717 735Right-handed alpha
Helix 25
AC7
A
743 772Right-handed alpha
Helix 26
AC8
A
773 779Right-handed alpha
Helix 27
AC9
A
780 800Right-handed alpha
Helix 28
AD1
A
807 822Right-handed 310
Helix 29
AD2
A
823 838Right-handed alpha
Helix 30
AD3
A
840 862Right-handed alpha
Helix 31
AD4
A
862 869Right-handed alpha
Helix 32
AD5
A
870 873Right-handed 310
Helix 33
AD6
A
886 899Right-handed alpha
Helix 34
AD7
A
902 911Right-handed alpha
Helix 35
AD8
A
914 944Right-handed alpha
Helix 36
AD9
A
1191 1206Right-handed alpha
Helix 37
AE1
A
1206 1225Right-handed alpha
Helix 38
AE2
A
1234 1263Right-handed alpha
Helix 39
AE3
A
1264 1270Right-handed alpha
Helix 40
AE4
A
1271 1293Right-handed alpha
Helix 41
AE5
A
1298 1307Right-handed alpha
Helix 42
AE6
A
1308 1316Right-handed 310
Helix 43
AE7
A
1319 1332Right-handed alpha
Helix 44
AE8
A
1332 1358Right-handed alpha
Helix 45
AE9
A
1382 1389Right-handed alpha
Helix 46
AF1
A
1406 1420Right-handed alpha
Helix 47
AF2
A
1423 1431Right-handed alpha
Helix 48
AF3
A
1445 1447Right-handed 310
Helix 49
AF4
A
1448 1460Right-handed alpha
Helix 50
AF5
A
1461 1482Right-handed alpha
Helix 51
AF6
A
1490 1504Right-handed alpha
Helix 52
AF7
A
1518 1529Right-handed alpha
Helix 53
AF8
A
1529 1549Right-handed alpha
Helix 54
AF9
A
1555 1585Right-handed alpha
Helix 55
AG1
A
1592 1617Right-handed alpha
Helix 56
AG2
A
1622 1630Right-handed alpha
Helix 57
AG3
A
1631 1636Right-handed alpha
Helix 58
AG4
A
1637 1640Right-handed 310
Helix 59
AG5
A
1642 1681Right-handed alpha
Helix 60
AG6
A
1698 1711Right-handed alpha
Helix 61
AG7
A
1714 1724Right-handed alpha
Helix 62
AG8
A
1746 1780Right-handed alpha
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There are 4 sheets in PDB entry 8T6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
102 107anti-parallel
Strand 3
A
93 96anti-parallel
Strand 4
A
81 82anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 283first strand
Strand 2
A
340 343anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
295 296anti-parallel
Strand 3
A
301 302anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1371 1374first strand
Strand 2
A
1363 1367anti-parallel
Strand 3
A
1395 1399anti-parallel
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