Analysis of interatomic Contacts of Structural Units in PDB entry:
8T7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T7C entry

There is 1 chain in PDB entry 8T7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 17PRO 1188
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 8T7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 25Right-handed alpha
Helix 2
AA2
A
79 85Right-handed alpha
Helix 3
AA3
A
91 93Right-handed 310
Helix 4
AA4
A
115 135Right-handed alpha
Helix 5
AA5
A
137 153Right-handed alpha
Helix 6
AA6
A
162 170Right-handed alpha
Helix 7
AA7
A
171 174Right-handed 310
Helix 8
AA8
A
179 191Right-handed alpha
Helix 9
AA9
A
199 215Right-handed alpha
Helix 10
AB1
A
216 221Right-handed 310
Helix 11
AB2
A
243 253Right-handed alpha
Helix 12
AB3
A
256 260Right-handed 310
Helix 13
AB4
A
261 274Right-handed alpha
Helix 14
AB5
A
275 280Right-handed alpha
Helix 15
AB6
A
286 295Right-handed alpha
Helix 16
AB7
A
296 300Right-handed 310
Helix 17
AB8
A
303 308Right-handed 310
Helix 18
AB9
A
310 314Right-handed 310
Helix 19
AC1
A
317 319Right-handed 310
Helix 20
AC2
A
341 351Right-handed alpha
Helix 21
AC3
A
382 393Right-handed alpha
Helix 22
AC4
A
410 426Right-handed alpha
Helix 23
AC5
A
427 429Right-handed 310
Helix 24
AC6
A
444 448Right-handed 310
Helix 25
AC7
A
639 643Right-handed 310
Helix 26
AC8
A
652 662Right-handed alpha
Helix 27
AC9
A
712 723Right-handed alpha
Helix 28
AD1
A
736 750Right-handed alpha
Helix 29
AD2
A
754 759Right-handed 310
Helix 30
AD3
A
828 830Right-handed 310
Helix 31
AD4
A
831 838Right-handed alpha
Helix 32
AD5
A
845 847Right-handed 310
Helix 33
AD6
A
892 908Right-handed alpha
Helix 34
AD7
A
927 932Right-handed alpha
Helix 35
AD8
A
960 970Right-handed alpha
Helix 36
AD9
A
970 981Right-handed alpha
Helix 37
AE1
A
999 1005Right-handed alpha
Helix 38
AE2
A
1018 1028Right-handed alpha
Helix 39
AE3
A
1029 1034Right-handed 310
Helix 40
AE4
A
1040 1045Right-handed 310
Helix 41
AE5
A
1053 1057Right-handed 310
Helix 42
AE6
A
1126 1129Right-handed 310
Helix 43
AE7
A
1156 1158Right-handed 310
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There are 12 sheets in PDB entry 8T7C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
51 55anti-parallel
Strand 3
A
39 46anti-parallel
Strand 4
A
26 31anti-parallel
Strand 5
A
107 113anti-parallel
Strand 6
A
95 100anti-parallel
Strand 7
A
70 75anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
197 198anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
284 285anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 323first strand
Strand 2
A
1036 1038anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 381first strand
Strand 2
A
369 370anti-parallel
Strand 3
A
355 361anti-parallel
Strand 4
A
401 407parallel
Strand 5
A
451 454parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
849 854first strand
Strand 2
A
502 506anti-parallel
Strand 3
A
490 499anti-parallel
Strand 4
A
478 485anti-parallel
Strand 5
A
886 889anti-parallel
Strand 6
A
873 878anti-parallel
Strand 7
A
858 862anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
668 673parallel
Strand 3
A
680 686anti-parallel
Strand 4
A
689 698anti-parallel
Strand 5
A
701 704anti-parallel
Strand 6
A
708 710anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 648first strand
Strand 2
A
668 673parallel
Strand 3
A
733 734parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
814 820first strand
Strand 2
A
806 811anti-parallel
Strand 3
A
795 800anti-parallel
Strand 4
A
773 776anti-parallel
Strand 5
A
824 826anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
938 939first strand
Strand 2
A
954 959parallel
Strand 3
A
982 986parallel
Strand 4
A
1009 1010parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1120 1124first strand
Strand 2
A
1061 1071anti-parallel
Strand 3
A
1174 1187anti-parallel
Strand 4
A
1161 1168anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1097 1100first strand
Strand 2
A
1083 1090anti-parallel
Strand 3
A
1131 1139anti-parallel
Strand 4
A
1145 1154anti-parallel
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