Analysis of interatomic Contacts of Structural Units in PDB entry:
8T7E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T7E entry

There are 5 chains in PDB entry 8T7E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 78THR 1227
B
 ALA 68VAL 485
C
 GLU 67VAL 485
P
 A 10 DA 27
T
 G 4 T 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8T7E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 108Right-handed alpha
Helix 2
AA2
A
134 140Right-handed alpha
Helix 3
AA3
A
141 146Right-handed alpha
Helix 4
AA4
A
148 160Right-handed alpha
Helix 5
AA5
A
270 276Right-handed alpha
Helix 6
AA6
A
294 301Right-handed alpha
Helix 7
AA7
A
306 316Right-handed alpha
Helix 8
AA8
A
345 351Right-handed alpha
Helix 9
AA9
A
358 364Right-handed alpha
Helix 10
AB1
A
388 418Right-handed alpha
Helix 11
AB2
A
420 431Right-handed alpha
Helix 12
AB3
A
440 448Right-handed alpha
Helix 13
AB4
A
448 469Right-handed alpha
Helix 14
AB5
A
539 550Right-handed alpha
Helix 15
AB6
A
570 575Right-handed alpha
Helix 16
AB7
A
598 603Right-handed alpha
Helix 17
AB8
A
793 809Right-handed alpha
Helix 18
AB9
A
893 903Right-handed alpha
Helix 19
AC1
A
914 919Right-handed alpha
Helix 20
AC2
A
932 940Right-handed alpha
Helix 21
AC3
A
944 955Right-handed alpha
Helix 22
AC4
A
958 969Right-handed alpha
Helix 23
AC5
A
973 980Right-handed alpha
Helix 24
AC6
A
982 989Right-handed alpha
Helix 25
AC7
A
1058 1066Right-handed alpha
Helix 26
AC8
A
1095 1115Right-handed alpha
Helix 27
AC9
A
1145 1168Right-handed alpha
Helix 28
AD1
B
70 77Right-handed alpha
Helix 29
AD2
B
87 94Right-handed alpha
Helix 30
AD3
B
100 119Right-handed alpha
Helix 31
AD4
B
173 177Right-handed 310
Helix 32
AD5
B
185 192Right-handed alpha
Helix 33
AD6
B
192 200Right-handed alpha
Helix 34
AD7
B
247 265Right-handed alpha
Helix 35
AD8
B
269 271Right-handed 310
Helix 36
AD9
B
310 315Right-handed alpha
Helix 37
AE1
B
342 354Right-handed alpha
Helix 38
AE2
B
394 409Right-handed alpha
Helix 39
AE3
B
417 419Right-handed 310
Helix 40
AE4
B
424 435Right-handed alpha
Helix 41
AE5
B
444 448Right-handed 310
Helix 42
AE6
B
470 485Right-handed alpha
Helix 43
AE7
C
68 76Right-handed alpha
Helix 44
AE8
C
87 93Right-handed alpha
Helix 45
AE9
C
100 119Right-handed alpha
Helix 46
AF1
C
185 192Right-handed alpha
Helix 47
AF2
C
192 200Right-handed alpha
Helix 48
AF3
C
247 264Right-handed alpha
Helix 49
AF4
C
308 315Right-handed alpha
Helix 50
AF5
C
342 354Right-handed alpha
Helix 51
AF6
C
391 409Right-handed alpha
Helix 52
AF7
C
444 450Right-handed alpha
Helix 53
AF8
C
470 478Right-handed alpha
Helix 54
AF9
C
479 484Right-handed alpha
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There are 10 sheets in PDB entry 8T7E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
175 177anti-parallel
Strand 3
A
222 223anti-parallel
Strand 4
A
212 215anti-parallel
Strand 5
A
194 198anti-parallel
Strand 6
A
265 268parallel
Strand 7
A
291 293parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 436first strand
Strand 2
A
839 840anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
884 890first strand
Strand 2
A
1136 1142anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 127first strand
Strand 2
B
206 218parallel
Strand 3
B
230 243anti-parallel
Strand 4
B
334 341anti-parallel
Strand 5
B
297 306anti-parallel
Strand 6
B
285 292anti-parallel
Strand 7
B
273 279anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 134first strand
Strand 2
B
180 181anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 326first strand
Strand 2
B
329 331anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
413 415first strand
Strand 2
B
381 387parallel
Strand 3
B
437 443parallel
Strand 4
B
452 457anti-parallel
Strand 5
B
463 467anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
125 127first strand
Strand 2
C
206 218parallel
Strand 3
C
230 243anti-parallel
Strand 4
C
334 341anti-parallel
Strand 5
C
297 306anti-parallel
Strand 6
C
286 292anti-parallel
Strand 7
C
273 277anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
324 326first strand
Strand 2
C
329 331anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
413 415first strand
Strand 2
C
383 386parallel
Strand 3
C
439 442parallel
Strand 4
C
452 457anti-parallel
Strand 5
C
463 467anti-parallel
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