Analysis of interatomic Contacts of Structural Units in PDB entry:
8T7F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8T7F entry

There are 7 chains in PDB entry 8T7F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	GLU 1	LYS 238
G	ILE 2	GLU 231
A	GLU 1	SER 239
B	MET 4	GLY 230
D	GLU 1	PRO 237
E	ILE 2	ARG 229
F	GLU 1	ALA 68

There are 36 helices in PDB entry 8T7F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	95	99	Right-handed 310
Helix 2	AA2	C	110	116	Right-handed alpha
Helix 3	AA3	C	211	213	Right-handed 310
Helix 4	AA4	G	95	99	Right-handed 310
Helix 5	AA5	G	139	144	Right-handed alpha
Helix 6	AA6	G	201	206	Right-handed alpha
Helix 7	AA7	A	95	99	Right-handed 310
Helix 8	AA8	A	110	115	Right-handed alpha
Helix 9	AA9	A	180	182	Right-handed 310
Helix 10	AB1	A	211	213	Right-handed 310
Helix 11	AB2	B	95	99	Right-handed 310
Helix 12	AB3	B	109	112	Right-handed 310
Helix 13	AB4	B	139	144	Right-handed alpha
Helix 14	AB5	B	201	206	Right-handed alpha
Helix 15	AB6	D	95	99	Right-handed 310
Helix 16	AB7	D	110	116	Right-handed alpha
Helix 17	AB8	D	180	182	Right-handed 310
Helix 18	AB9	E	139	146	Right-handed alpha
Helix 19	AC1	E	201	206	Right-handed alpha
Helix 20	AC2	F	95	99	Right-handed 310
Helix 21	AC3	F	110	116	Right-handed alpha
Helix 22	AC4	F	180	182	Right-handed 310
Helix 23	AC5	H	139	144	Right-handed alpha
Helix 24	AC6	H	201	205	Right-handed alpha
Helix 25	AC7	I	95	99	Right-handed 310
Helix 26	AC8	I	110	117	Right-handed alpha
Helix 27	AC9	I	211	213	Right-handed 310
Helix 28	AD1	J	95	99	Right-handed 310
Helix 29	AD2	J	139	146	Right-handed alpha
Helix 30	AD3	J	200	206	Right-handed alpha
Helix 31	AD4	K	95	99	Right-handed 310
Helix 32	AD5	K	110	116	Right-handed alpha
Helix 33	AD6	K	180	182	Right-handed 310
Helix 34	AD7	K	209	213	Right-handed 310
Helix 35	AD8	L	139	144	Right-handed alpha
Helix 36	AD9	L	201	205	Right-handed alpha

There are 60 sheets in PDB entry 8T7F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	7	first strand
Strand 2	C	19	26	anti-parallel
Strand 3	C	86	91	anti-parallel
Strand 4	C	76	81	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	13	first strand
Strand 2	C	131	135	parallel
Strand 3	C	100	106	anti-parallel
Strand 4	C	35	44	anti-parallel
Strand 5	C	51	57	anti-parallel
Strand 6	C	62	67	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	144	147	first strand
Strand 2	C	159	169	anti-parallel
Strand 3	C	200	209	anti-parallel
Strand 4	C	187	189	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	144	147	first strand
Strand 2	C	159	169	anti-parallel
Strand 3	C	200	209	anti-parallel
Strand 4	C	193	194	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	178	first strand
Strand 2	C	219	224	anti-parallel
Strand 3	C	229	234	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	24	first strand
Strand 2	G	86	91	anti-parallel
Strand 3	G	78	83	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	51	52	first strand
Strand 2	G	39	44	anti-parallel
Strand 3	G	101	108	anti-parallel
Strand 4	G	113	116	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	51	52	first strand
Strand 2	G	39	44	anti-parallel
Strand 3	G	101	108	anti-parallel
Strand 4	G	120	121	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	133	136	first strand
Strand 2	G	147	157	anti-parallel
Strand 3	G	191	200	anti-parallel
Strand 4	G	177	178	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	162	168	first strand
Strand 2	G	209	216	anti-parallel
Strand 3	G	223	228	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	7	first strand
Strand 2	A	19	26	anti-parallel
Strand 3	A	86	91	anti-parallel
Strand 4	A	76	81	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	13	first strand
Strand 2	A	131	135	parallel
Strand 3	A	100	107	anti-parallel
Strand 4	A	34	44	anti-parallel
Strand 5	A	50	57	anti-parallel
Strand 6	A	62	67	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	148	first strand
Strand 2	A	159	169	anti-parallel
Strand 3	A	200	209	anti-parallel
Strand 4	A	193	194	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	178	first strand
Strand 2	A	220	224	anti-parallel
Strand 3	A	229	231	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	13	first strand
Strand 2	B	120	124	parallel
Strand 3	B	101	108	anti-parallel
Strand 4	B	39	44	anti-parallel
Strand 5	B	51	52	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	13	first strand
Strand 2	B	120	124	parallel
Strand 3	B	101	108	anti-parallel
Strand 4	B	113	116	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	24	first strand
Strand 2	B	86	91	anti-parallel
Strand 3	B	76	83	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	136	first strand
Strand 2	B	147	152	anti-parallel
Strand 3	B	195	200	anti-parallel
Strand 4	B	177	178	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	173	first strand
Strand 2	B	162	168	anti-parallel
Strand 3	B	210	216	anti-parallel
Strand 4	B	223	227	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	19	26	anti-parallel
Strand 3	D	86	91	anti-parallel
Strand 4	D	76	81	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	13	first strand
Strand 2	D	131	135	parallel
Strand 3	D	100	106	anti-parallel
Strand 4	D	35	44	anti-parallel
Strand 5	D	50	57	anti-parallel
Strand 6	D	62	67	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	144	148	first strand
Strand 2	D	160	169	anti-parallel
Strand 3	D	200	208	anti-parallel
Strand 4	D	188	189	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	144	148	first strand
Strand 2	D	160	169	anti-parallel
Strand 3	D	200	208	anti-parallel
Strand 4	D	193	194	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	175	178	first strand
Strand 2	D	219	224	anti-parallel
Strand 3	D	229	234	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	13	first strand
Strand 2	E	123	124	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	24	first strand
Strand 2	E	86	91	anti-parallel
Strand 3	E	76	83	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	55	first strand
Strand 2	E	39	44	anti-parallel
Strand 3	E	101	108	anti-parallel
Strand 4	E	113	116	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	55	first strand
Strand 2	E	39	44	anti-parallel
Strand 3	E	101	108	anti-parallel
Strand 4	E	120	121	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	132	136	first strand
Strand 2	E	147	157	anti-parallel
Strand 3	E	191	200	anti-parallel
Strand 4	E	177	181	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	163	168	first strand
Strand 2	E	209	215	anti-parallel
Strand 3	E	223	228	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	19	26	anti-parallel
Strand 3	F	86	91	anti-parallel
Strand 4	F	76	81	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	13	first strand
Strand 2	F	131	135	parallel
Strand 3	F	100	108	anti-parallel
Strand 4	F	33	44	anti-parallel
Strand 5	F	51	57	anti-parallel
Strand 6	F	62	67	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	144	148	first strand
Strand 2	F	160	169	anti-parallel
Strand 3	F	200	208	anti-parallel
Strand 4	F	187	189	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	144	148	first strand
Strand 2	F	160	169	anti-parallel
Strand 3	F	200	208	anti-parallel
Strand 4	F	193	194	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	175	178	first strand
Strand 2	F	219	224	anti-parallel
Strand 3	F	229	234	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	7	first strand
Strand 2	H	19	24	anti-parallel
Strand 3	H	86	91	anti-parallel
Strand 4	H	78	80	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	120	124	parallel
Strand 3	H	101	107	anti-parallel
Strand 4	H	40	44	anti-parallel
Strand 5	H	51	54	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	120	124	parallel
Strand 3	H	101	107	anti-parallel
Strand 4	H	114	116	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	132	136	first strand
Strand 2	H	147	157	anti-parallel
Strand 3	H	191	200	anti-parallel
Strand 4	H	177	178	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	172	173	first strand
Strand 2	H	163	168	anti-parallel
Strand 3	H	209	215	anti-parallel
Strand 4	H	223	228	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	7	first strand
Strand 2	I	19	26	anti-parallel
Strand 3	I	86	91	anti-parallel
Strand 4	I	76	81	anti-parallel

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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	12	13	first strand
Strand 2	I	131	135	parallel
Strand 3	I	100	107	anti-parallel
Strand 4	I	34	44	anti-parallel
Strand 5	I	51	57	anti-parallel
Strand 6	I	62	67	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	144	148	first strand
Strand 2	I	159	169	anti-parallel
Strand 3	I	200	209	anti-parallel
Strand 4	I	188	189	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	144	148	first strand
Strand 2	I	159	169	anti-parallel
Strand 3	I	200	209	anti-parallel
Strand 4	I	193	194	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	175	178	first strand
Strand 2	I	219	224	anti-parallel
Strand 3	I	229	234	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	4	6	first strand
Strand 2	J	19	25	anti-parallel
Strand 3	J	86	91	anti-parallel
Strand 4	J	76	83	anti-parallel

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There are 6 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	13	first strand
Strand 2	J	120	124	parallel
Strand 3	J	101	108	anti-parallel
Strand 4	J	39	44	anti-parallel
Strand 5	J	51	55	anti-parallel
Strand 6	J	66	67	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	13	first strand
Strand 2	J	120	124	parallel
Strand 3	J	101	108	anti-parallel
Strand 4	J	113	116	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	134	136	first strand
Strand 2	J	150	157	anti-parallel
Strand 3	J	191	197	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	172	173	first strand
Strand 2	J	166	168	anti-parallel
Strand 3	J	210	214	anti-parallel
Strand 4	J	223	227	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	3	7	first strand
Strand 2	K	19	26	anti-parallel
Strand 3	K	86	91	anti-parallel
Strand 4	K	76	81	anti-parallel

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There are 6 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	11	13	first strand
Strand 2	K	131	135	parallel
Strand 3	K	100	107	anti-parallel
Strand 4	K	34	44	anti-parallel
Strand 5	K	51	57	anti-parallel
Strand 6	K	62	67	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	144	148	first strand
Strand 2	K	160	169	anti-parallel
Strand 3	K	200	208	anti-parallel
Strand 4	K	187	189	anti-parallel

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There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	144	148	first strand
Strand 2	K	160	169	anti-parallel
Strand 3	K	200	208	anti-parallel
Strand 4	K	193	194	anti-parallel

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There are 3 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	175	178	first strand
Strand 2	K	219	224	anti-parallel
Strand 3	K	229	234	anti-parallel

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There are 3 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	7	first strand
Strand 2	L	22	24	anti-parallel
Strand 3	L	86	88	anti-parallel

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There are 5 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	120	124	parallel
Strand 3	L	101	108	anti-parallel
Strand 4	L	40	44	anti-parallel
Strand 5	L	51	52	anti-parallel

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There are 4 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	120	124	parallel
Strand 3	L	101	108	anti-parallel
Strand 4	L	113	116	anti-parallel

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There are 4 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	132	136	first strand
Strand 2	L	147	157	anti-parallel
Strand 3	L	191	200	anti-parallel
Strand 4	L	177	178	anti-parallel

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There are 4 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	172	173	first strand
Strand 2	L	163	168	anti-parallel
Strand 3	L	210	215	anti-parallel
Strand 4	L	223	227	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8T7F

Analysis of interatomic Contacts of Structural Units in PDB entry:
8T7F