Analysis of interatomic Contacts of Structural Units in PDB entry:
8T7H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8T7H entry

There are 4 chains in PDB entry 8T7H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 25	ALA 827
B	ARG 25	ALA 827
C	GLN 3	SER 125
D	GLN 3	SER 125

There are 55 helices in PDB entry 8T7H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	82	Right-handed alpha
Helix 2	AA2	A	101	116	Right-handed alpha
Helix 3	AA3	A	117	122	Right-handed alpha
Helix 4	AA4	A	153	163	Right-handed alpha
Helix 5	AA5	A	197	209	Right-handed alpha
Helix 6	AA6	A	223	237	Right-handed alpha
Helix 7	AA7	A	254	266	Right-handed alpha
Helix 8	AA8	A	279	294	Right-handed alpha
Helix 9	AA9	A	304	308	Right-handed 310
Helix 10	AB1	A	334	342	Right-handed alpha
Helix 11	AB2	A	343	344	Right-handed 310
Helix 12	AB3	A	345	349	Right-handed 310
Helix 13	AB4	A	355	364	Right-handed alpha
Helix 14	AB5	A	396	419	Right-handed alpha
Helix 15	AB6	A	426	430	Right-handed 310
Helix 16	AB7	A	433	442	Right-handed alpha
Helix 17	AB8	A	577	604	Right-handed alpha
Helix 18	AB9	A	607	613	Right-handed alpha
Helix 19	AC1	A	614	633	Right-handed alpha
Helix 20	AC2	A	642	673	Right-handed alpha
Helix 21	AC3	A	689	715	Right-handed alpha
Helix 22	AC4	A	736	761	Right-handed alpha
Helix 23	AC5	A	765	789	Right-handed alpha
Helix 24	AC6	A	790	794	Right-handed 310
Helix 25	AC7	A	797	827	Right-handed alpha
Helix 26	AC8	B	65	82	Right-handed alpha
Helix 27	AC9	B	101	118	Right-handed alpha
Helix 28	AD1	B	153	163	Right-handed alpha
Helix 29	AD2	B	177	181	Right-handed 310
Helix 30	AD3	B	197	209	Right-handed alpha
Helix 31	AD4	B	223	237	Right-handed alpha
Helix 32	AD5	B	254	266	Right-handed alpha
Helix 33	AD6	B	279	294	Right-handed alpha
Helix 34	AD7	B	304	308	Right-handed 310
Helix 35	AD8	B	334	342	Right-handed alpha
Helix 36	AD9	B	343	344	Right-handed 310
Helix 37	AE1	B	345	349	Right-handed 310
Helix 38	AE2	B	355	364	Right-handed alpha
Helix 39	AE3	B	396	419	Right-handed alpha
Helix 40	AE4	B	426	430	Right-handed 310
Helix 41	AE5	B	433	442	Right-handed alpha
Helix 42	AE6	B	577	604	Right-handed alpha
Helix 43	AE7	B	607	613	Right-handed alpha
Helix 44	AE8	B	614	633	Right-handed alpha
Helix 45	AE9	B	642	673	Right-handed alpha
Helix 46	AF1	B	689	715	Right-handed alpha
Helix 47	AF2	B	736	761	Right-handed alpha
Helix 48	AF3	B	765	789	Right-handed alpha
Helix 49	AF4	B	797	827	Right-handed alpha
Helix 50	AF5	C	30	34	Right-handed 310
Helix 51	AF6	C	64	67	Right-handed 310
Helix 52	AF7	C	89	93	Right-handed 310
Helix 53	AF8	D	30	34	Right-handed 310
Helix 54	AF9	D	64	67	Right-handed 310
Helix 55	AG1	D	89	93	Right-handed 310

There are 20 sheets in PDB entry 8T7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	93	97	anti-parallel
Strand 3	A	38	41	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	171	first strand
Strand 2	A	188	190	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	217	first strand
Strand 2	A	273	276	parallel
Strand 3	A	300	303	parallel
Strand 4	A	325	329	parallel
Strand 5	A	466	475	anti-parallel
Strand 6	A	478	483	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	446	447	first strand
Strand 2	A	453	454	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	521	523	first strand
Strand 2	A	533	535	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	541	543	first strand
Strand 2	A	549	551	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	558	first strand
Strand 2	A	565	567	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	570	571	first strand
Strand 2	A	729	733	parallel
Strand 3	A	719	722	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	91	97	anti-parallel
Strand 3	B	35	41	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	171	first strand
Strand 2	B	188	190	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	242	first strand
Strand 2	B	213	217	parallel
Strand 3	B	273	276	parallel
Strand 4	B	300	303	parallel
Strand 5	B	325	329	parallel
Strand 6	B	466	472	anti-parallel
Strand 7	B	480	483	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	446	447	first strand
Strand 2	B	453	454	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	521	523	first strand
Strand 2	B	533	535	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	541	543	first strand
Strand 2	B	549	551	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	556	558	first strand
Strand 2	B	565	567	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	570	571	first strand
Strand 2	B	729	733	parallel
Strand 3	B	719	722	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	6	9	first strand
Strand 2	C	19	26	anti-parallel
Strand 3	C	80	86	anti-parallel
Strand 4	C	71	75	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	119	123	parallel
Strand 3	C	94	101	anti-parallel
Strand 4	C	35	41	anti-parallel
Strand 5	C	48	53	anti-parallel
Strand 6	C	60	62	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	9	first strand
Strand 2	D	20	26	anti-parallel
Strand 3	D	80	85	anti-parallel
Strand 4	D	70	75	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	14	first strand
Strand 2	D	119	123	parallel
Strand 3	D	94	101	anti-parallel
Strand 4	D	35	41	anti-parallel
Strand 5	D	48	53	anti-parallel
Strand 6	D	60	62	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8T7H

Analysis of interatomic Contacts of Structural Units in PDB entry:
8T7H