Analysis of interatomic Contacts of Structural Units in PDB entry:
8T7R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T7R entry

There are 50 chains in PDB entry 8T7R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 206
B
 GLN 1LYS 225
C
 GLY 1TRP 274
0
 VAL 401TYR 409
D
 ILE 1MET 99
E
 SER 2LYS 206
F
 GLN 1LYS 225
G
 GLY 1TRP 274
1
 VAL 401TYR 409
H
 ILE 1MET 99
I
 SER 2LYS 206
J
 GLN 1LYS 225
K
 GLY 1TRP 274
2
 VAL 401TYR 409
L
 ILE 1MET 99
M
 SER 2LYS 206
N
 GLN 1LYS 225
O
 GLY 1TRP 274
3
 VAL 401TYR 409
P
 ILE 1MET 99
Q
 SER 2LYS 206
R
 GLN 1LYS 225
S
 GLY 1TRP 274
4
 VAL 401TYR 409
T
 ILE 1MET 99
U
 SER 2LYS 206
V
 GLN 1LYS 225
W
 GLY 1TRP 274
5
 VAL 401TYR 409
X
 ILE 1MET 99
Y
 SER 2LYS 206
Z
 GLN 1LYS 225
a
 GLY 1THR 182
6
 VAL 401TYR 409
b
 ILE 1MET 99
c
 SER 2LYS 206
d
 GLN 1LYS 225
e
 GLY 1THR 182
7
 VAL 401TYR 409
f
 ILE 1MET 99
g
 SER 2LYS 206
h
 GLN 1LYS 225
i
 GLY 1THR 182
8
 VAL 401TYR 409
k
 SER 2LYS 206
l
 VAL 2LYS 225
o
 SER 2VAL 204
p
 VAL 2LYS 225
s
 SER 2LYS 206
t
 GLN 1LYS 225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are152 helices in PDB entry 8T7R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 30Right-handed 310
Helix 2
AA2
A
78 82Right-handed 310
Helix 3
AA3
A
123 128Right-handed alpha
Helix 4
AA4
A
183 190Right-handed alpha
Helix 5
AA5
B
28 30Right-handed 310
Helix 6
AA6
B
87 91Right-handed 310
Helix 7
AA7
B
167 169Right-handed 310
Helix 8
AA8
B
198 203Right-handed alpha
Helix 9
AA9
C
56 85Right-handed alpha
Helix 10
AB1
C
137 150Right-handed alpha
Helix 11
AB2
C
151 161Right-handed alpha
Helix 12
AB3
C
162 175Right-handed alpha
Helix 13
AB4
C
175 180Right-handed alpha
Helix 14
AB5
C
253 255Right-handed 310
Helix 15
AB6
E
26 30Right-handed 310
Helix 16
AB7
E
78 82Right-handed 310
Helix 17
AB8
E
123 128Right-handed alpha
Helix 18
AB9
E
183 190Right-handed alpha
Helix 19
AC1
F
28 32Right-handed 310
Helix 20
AC2
F
62 65Right-handed 310
Helix 21
AC3
F
87 91Right-handed 310
Helix 22
AC4
F
212 215Right-handed 310
Helix 23
AC5
G
56 85Right-handed alpha
Helix 24
AC6
G
137 150Right-handed alpha
Helix 25
AC7
G
151 161Right-handed alpha
Helix 26
AC8
G
162 175Right-handed alpha
Helix 27
AC9
G
175 180Right-handed alpha
Helix 28
AD1
G
253 255Right-handed 310
Helix 29
AD2
I
26 30Right-handed 310
Helix 30
AD3
I
78 82Right-handed 310
Helix 31
AD4
I
92 95Right-handed 310
Helix 32
AD5
I
123 128Right-handed alpha
Helix 33
AD6
I
183 190Right-handed alpha
Helix 34
AD7
J
28 30Right-handed 310
Helix 35
AD8
J
62 65Right-handed 310
Helix 36
AD9
J
87 91Right-handed 310
Helix 37
AE1
J
212 215Right-handed 310
Helix 38
AE2
K
56 85Right-handed alpha
Helix 39
AE3
K
137 151Right-handed alpha
Helix 40
AE4
K
151 161Right-handed alpha
Helix 41
AE5
K
162 175Right-handed alpha
Helix 42
AE6
K
175 180Right-handed alpha
Helix 43
AE7
K
253 255Right-handed 310
Helix 44
AE8
M
26 30Right-handed 310
Helix 45
AE9
M
78 82Right-handed 310
Helix 46
AF1
M
123 128Right-handed alpha
Helix 47
AF2
M
183 190Right-handed alpha
Helix 48
AF3
N
28 32Right-handed 310
Helix 49
AF4
N
62 65Right-handed 310
Helix 50
AF5
N
87 91Right-handed 310
Helix 51
AF6
N
212 215Right-handed 310
Helix 52
AF7
O
56 85Right-handed alpha
Helix 53
AF8
O
137 151Right-handed alpha
Helix 54
AF9
O
151 161Right-handed alpha
Helix 55
AG1
O
162 175Right-handed alpha
Helix 56
AG2
O
175 180Right-handed alpha
Helix 57
AG3
O
253 255Right-handed 310
Helix 58
AG4
Q
26 30Right-handed 310
Helix 59
AG5
Q
78 82Right-handed 310
Helix 60
AG6
Q
123 128Right-handed alpha
Helix 61
AG7
Q
183 190Right-handed alpha
Helix 62
AG8
R
28 30Right-handed 310
Helix 63
AG9
R
62 65Right-handed 310
Helix 64
AH1
R
87 91Right-handed 310
Helix 65
AH2
R
167 169Right-handed 310
Helix 66
AH3
R
212 215Right-handed 310
Helix 67
AH4
S
56 85Right-handed alpha
Helix 68
AH5
S
138 150Right-handed alpha
Helix 69
AH6
S
151 161Right-handed alpha
Helix 70
AH7
S
162 175Right-handed alpha
Helix 71
AH8
S
175 180Right-handed alpha
Helix 72
AH9
S
253 255Right-handed 310
Helix 73
AI1
U
26 30Right-handed 310
Helix 74
AI2
U
78 82Right-handed 310
Helix 75
AI3
U
123 128Right-handed alpha
Helix 76
AI4
U
183 190Right-handed alpha
Helix 77
AI5
V
28 32Right-handed 310
Helix 78
AI6
V
62 65Right-handed 310
Helix 79
AI7
V
87 91Right-handed 310
Helix 80
AI8
V
212 215Right-handed 310
Helix 81
AI9
W
56 85Right-handed alpha
Helix 82
AJ1
W
138 150Right-handed alpha
Helix 83
AJ2
W
151 161Right-handed alpha
Helix 84
AJ3
W
162 175Right-handed alpha
Helix 85
AJ4
W
175 180Right-handed alpha
Helix 86
AJ5
W
253 255Right-handed 310
Helix 87
AJ6
Y
26 30Right-handed 310
Helix 88
AJ7
Y
78 82Right-handed 310
Helix 89
AJ8
Y
123 128Right-handed alpha
Helix 90
AJ9
Y
183 190Right-handed alpha
Helix 91
AK1
Z
28 30Right-handed 310
Helix 92
AK2
Z
62 65Right-handed 310
Helix 93
AK3
Z
87 91Right-handed 310
Helix 94
AK4
Z
212 215Right-handed 310
Helix 95
AK5
a
56 85Right-handed alpha
Helix 96
AK6
a
138 148Right-handed alpha
Helix 97
AK7
a
151 162Right-handed alpha
Helix 98
AK8
a
162 175Right-handed alpha
Helix 99
AK9
a
175 180Right-handed alpha
Helix 100
AL1
c
26 30Right-handed 310
Helix 101
AL2
c
78 82Right-handed 310
Helix 102
AL3
c
123 128Right-handed alpha
Helix 103
AL4
c
183 190Right-handed alpha
Helix 104
AL5
d
28 32Right-handed 310
Helix 105
AL6
d
62 65Right-handed 310
Helix 106
AL7
d
87 91Right-handed 310
Helix 107
AL8
d
212 215Right-handed 310
Helix 108
AL9
e
56 85Right-handed alpha
Helix 109
AM1
e
138 148Right-handed alpha
Helix 110
AM2
e
151 162Right-handed alpha
Helix 111
AM3
e
162 175Right-handed alpha
Helix 112
AM4
e
175 180Right-handed alpha
Helix 113
AM5
g
26 30Right-handed 310
Helix 114
AM6
g
78 82Right-handed 310
Helix 115
AM7
g
123 128Right-handed alpha
Helix 116
AM8
g
183 190Right-handed alpha
Helix 117
AM9
h
28 30Right-handed 310
Helix 118
AN1
h
62 65Right-handed 310
Helix 119
AN2
h
87 91Right-handed 310
Helix 120
AN3
h
167 169Right-handed 310
Helix 121
AN4
h
212 215Right-handed 310
Helix 122
AN5
i
56 85Right-handed alpha
Helix 123
AN6
i
140 149Right-handed alpha
Helix 124
AN7
i
151 162Right-handed alpha
Helix 125
AN8
i
162 175Right-handed alpha
Helix 126
AN9
i
175 180Right-handed alpha
Helix 127
AO1
k
26 30Right-handed 310
Helix 128
AO2
k
78 82Right-handed 310
Helix 129
AO3
k
123 128Right-handed alpha
Helix 130
AO4
k
183 190Right-handed alpha
Helix 131
AO5
l
28 30Right-handed 310
Helix 132
AO6
l
62 65Right-handed 310
Helix 133
AO7
l
87 91Right-handed 310
Helix 134
AO8
l
167 169Right-handed 310
Helix 135
AO9
l
212 215Right-handed 310
Helix 136
AP1
o
26 30Right-handed 310
Helix 137
AP2
o
78 82Right-handed 310
Helix 138
AP3
o
92 95Right-handed 310
Helix 139
AP4
o
123 128Right-handed alpha
Helix 140
AP5
o
183 190Right-handed alpha
Helix 141
AP6
p
28 30Right-handed 310
Helix 142
AP7
p
62 65Right-handed 310
Helix 143
AP8
p
87 91Right-handed 310
Helix 144
AP9
p
213 215Right-handed 310
Helix 145
AQ1
s
26 30Right-handed 310
Helix 146
AQ2
s
78 82Right-handed 310
Helix 147
AQ3
s
123 128Right-handed alpha
Helix 148
AQ4
s
183 190Right-handed alpha
Helix 149
AQ5
t
28 32Right-handed 310
Helix 150
AQ6
t
62 65Right-handed 310
Helix 151
AQ7
t
87 91Right-handed 310
Helix 152
AQ8
t
212 215Right-handed 310
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