Analysis of interatomic Contacts of Structural Units in PDB entry:
8T7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8T7T entry

There are 2 chains in PDB entry 8T7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1011LYS 1493
B
 LEU 1011LYS 1493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 8T7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1011 1020Right-handed alpha
Helix 2
AA2
A
1024 1035Right-handed alpha
Helix 3
AA3
A
1040 1046Right-handed alpha
Helix 4
AA4
A
1057 1077Right-handed alpha
Helix 5
AA5
A
1118 1130Right-handed alpha
Helix 6
AA6
A
1171 1188Right-handed alpha
Helix 7
AA7
A
1188 1193Right-handed alpha
Helix 8
AA8
A
1203 1214Right-handed alpha
Helix 9
AA9
A
1219 1234Right-handed alpha
Helix 10
AB1
A
1236 1247Right-handed alpha
Helix 11
AB2
A
1250 1256Right-handed alpha
Helix 12
AB3
A
1270 1276Right-handed alpha
Helix 13
AB4
A
1283 1305Right-handed alpha
Helix 14
AB5
A
1355 1360Right-handed alpha
Helix 15
AB6
A
1378 1387Right-handed alpha
Helix 16
AB7
A
1405 1407Right-handed 310
Helix 17
AB8
A
1408 1422Right-handed alpha
Helix 18
AB9
A
1435 1447Right-handed alpha
Helix 19
AC1
A
1455 1459Right-handed 310
Helix 20
AC2
A
1481 1493Right-handed alpha
Helix 21
AC3
B
1012 1020Right-handed alpha
Helix 22
AC4
B
1024 1034Right-handed alpha
Helix 23
AC5
B
1040 1047Right-handed alpha
Helix 24
AC6
B
1057 1077Right-handed alpha
Helix 25
AC7
B
1118 1130Right-handed alpha
Helix 26
AC8
B
1171 1188Right-handed alpha
Helix 27
AC9
B
1188 1193Right-handed alpha
Helix 28
AD1
B
1203 1214Right-handed alpha
Helix 29
AD2
B
1216 1218Right-handed 310
Helix 30
AD3
B
1219 1234Right-handed alpha
Helix 31
AD4
B
1236 1247Right-handed alpha
Helix 32
AD5
B
1250 1259Right-handed alpha
Helix 33
AD6
B
1270 1276Right-handed alpha
Helix 34
AD7
B
1281 1305Right-handed alpha
Helix 35
AD8
B
1355 1360Right-handed alpha
Helix 36
AD9
B
1378 1388Right-handed alpha
Helix 37
AE1
B
1405 1407Right-handed 310
Helix 38
AE2
B
1408 1422Right-handed alpha
Helix 39
AE3
B
1435 1447Right-handed alpha
Helix 40
AE4
B
1455 1459Right-handed 310
Helix 41
AE5
B
1481 1493Right-handed alpha
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There are 5 sheets in PDB entry 8T7T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1081 1082first strand
Strand 2
A
1134 1144parallel
Strand 3
A
1154 1165anti-parallel
Strand 4
A
1370 1377anti-parallel
Strand 5
A
1340 1351anti-parallel
Strand 6
A
1327 1337anti-parallel
Strand 7
A
1197 1202anti-parallel
Strand 8
A
1311 1314parallel
Strand 9
A
1264 1265anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1089 1090first strand
Strand 2
A
1111 1113anti-parallel
Strand 3
A
1103 1106anti-parallel
Strand 4
B
1103 1106anti-parallel
Strand 5
B
1112 1113anti-parallel
Strand 6
B
1089 1090anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1426 1428first strand
Strand 2
A
1399 1403parallel
Strand 3
A
1450 1454parallel
Strand 4
A
1461 1466anti-parallel
Strand 5
A
1473 1478anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1081 1082first strand
Strand 2
B
1134 1144parallel
Strand 3
B
1154 1165anti-parallel
Strand 4
B
1370 1377anti-parallel
Strand 5
B
1340 1351anti-parallel
Strand 6
B
1327 1337anti-parallel
Strand 7
B
1197 1202anti-parallel
Strand 8
B
1311 1314parallel
Strand 9
B
1264 1265anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1426 1428first strand
Strand 2
B
1399 1403parallel
Strand 3
B
1450 1454parallel
Strand 4
B
1461 1468anti-parallel
Strand 5
B
1471 1478anti-parallel
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