Analysis of interatomic Contacts of Structural Units in PDB entry:
8TA4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TA4 entry

There are 2 chains in PDB entry 8TA4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 14GLY 841
B
 ALA 14GLY 841
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8TA4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
89 126Right-handed alpha
Helix 2
AA2
A
129 156Right-handed alpha
Helix 3
AA3
A
157 160Right-handed 310
Helix 4
AA4
A
163 171Right-handed alpha
Helix 5
AA5
A
181 197Right-handed alpha
Helix 6
AA6
A
204 223Right-handed alpha
Helix 7
AA7
A
231 253Right-handed alpha
Helix 8
AA8
A
254 267Right-handed alpha
Helix 9
AA9
A
272 297Right-handed alpha
Helix 10
AB1
A
320 352Right-handed alpha
Helix 11
AB2
A
352 362Right-handed alpha
Helix 12
AB3
A
364 378Right-handed alpha
Helix 13
AB4
A
383 388Right-handed 310
Helix 14
AB5
A
392 401Right-handed alpha
Helix 15
AB6
A
420 425Right-handed alpha
Helix 16
AB7
A
430 450Right-handed alpha
Helix 17
AB8
A
458 481Right-handed alpha
Helix 18
AB9
A
495 513Right-handed alpha
Helix 19
AC1
A
516 526Right-handed alpha
Helix 20
AC2
A
530 547Right-handed alpha
Helix 21
AC3
A
551 560Right-handed alpha
Helix 22
AC4
A
573 578Right-handed 310
Helix 23
AC5
A
579 583Right-handed 310
Helix 24
AC6
A
596 606Right-handed alpha
Helix 25
AC7
A
629 641Right-handed alpha
Helix 26
AC8
A
774 779Right-handed 310
Helix 27
AC9
A
802 813Right-handed alpha
Helix 28
AD1
A
832 841Right-handed alpha
Helix 29
AD2
B
89 126Right-handed alpha
Helix 30
AD3
B
129 156Right-handed alpha
Helix 31
AD4
B
157 160Right-handed 310
Helix 32
AD5
B
163 171Right-handed alpha
Helix 33
AD6
B
181 197Right-handed alpha
Helix 34
AD7
B
204 223Right-handed alpha
Helix 35
AD8
B
231 253Right-handed alpha
Helix 36
AD9
B
254 267Right-handed alpha
Helix 37
AE1
B
272 297Right-handed alpha
Helix 38
AE2
B
320 351Right-handed alpha
Helix 39
AE3
B
353 362Right-handed alpha
Helix 40
AE4
B
364 378Right-handed alpha
Helix 41
AE5
B
383 387Right-handed 310
Helix 42
AE6
B
392 401Right-handed alpha
Helix 43
AE7
B
430 451Right-handed alpha
Helix 44
AE8
B
458 481Right-handed alpha
Helix 45
AE9
B
495 513Right-handed alpha
Helix 46
AF1
B
516 526Right-handed alpha
Helix 47
AF2
B
530 549Right-handed alpha
Helix 48
AF3
B
551 561Right-handed alpha
Helix 49
AF4
B
573 578Right-handed 310
Helix 50
AF5
B
579 583Right-handed 310
Helix 51
AF6
B
596 607Right-handed alpha
Helix 52
AF7
B
629 641Right-handed alpha
Helix 53
AF8
B
802 813Right-handed alpha
Helix 54
AF9
B
832 841Right-handed alpha
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There are 7 sheets in PDB entry 8TA4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 19first strand
Strand 2
A
24 27anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 271first strand
Strand 2
B
269 271anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 591first strand
Strand 2
A
611 615parallel
Strand 3
A
623 628anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
796 797first strand
Strand 2
A
817 820parallel
Strand 3
A
828 831anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
25 27anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
590 591first strand
Strand 2
B
611 615parallel
Strand 3
B
623 628anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
796 797first strand
Strand 2
B
817 822parallel
Strand 3
B
825 831anti-parallel
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