Analysis of interatomic Contacts of Structural Units in PDB entry:
8TA6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TA6 entry

There are 2 chains in PDB entry 8TA6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 567GLY 841
B
 GLU 567GLY 841
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8TA6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
573 578Right-handed 310
Helix 2
AA2
A
579 583Right-handed 310
Helix 3
AA3
A
596 607Right-handed alpha
Helix 4
AA4
A
629 641Right-handed alpha
Helix 5
AA5
A
784 788Right-handed 310
Helix 6
AA6
A
802 811Right-handed alpha
Helix 7
AA7
A
832 841Right-handed alpha
Helix 8
AA8
B
599 604Right-handed alpha
Helix 9
AA9
B
628 640Right-handed alpha
Helix 10
AB1
B
802 814Right-handed alpha
Helix 11
AB2
B
832 839Right-handed alpha
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There are 4 sheets in PDB entry 8TA6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 592first strand
Strand 2
A
611 615parallel
Strand 3
A
623 628anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
796 798first strand
Strand 2
A
817 822parallel
Strand 3
A
825 831anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
590 592first strand
Strand 2
B
613 615parallel
Strand 3
B
623 625anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
796 797first strand
Strand 2
B
817 820parallel
Strand 3
B
828 831anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il