Analysis of interatomic Contacts of Structural Units in PDB entry:
8TB2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TB2 entry

There is 1 chain in PDB entry 8TB2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 160ASN 421
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 8TB2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
170 172Right-handed 310
Helix 2
AA2
A
251 259Right-handed alpha
Helix 3
AA3
A
283 289Right-handed alpha
Helix 4
AA4
A
374 378Right-handed alpha
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There are 4 sheets in PDB entry 8TB2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
415 418anti-parallel
Strand 3
A
223 230anti-parallel
Strand 4
A
407 409anti-parallel
Strand 5
A
193 197anti-parallel
Strand 6
A
180 184anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
415 418anti-parallel
Strand 3
A
223 230anti-parallel
Strand 4
A
348 355anti-parallel
Strand 5
A
360 365anti-parallel
Strand 6
A
368 373anti-parallel
Strand 7
A
316 317anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 178first strand
Strand 2
A
206 213anti-parallel
Strand 3
A
384 394anti-parallel
Strand 4
A
242 248anti-parallel
Strand 5
A
271 276anti-parallel
Strand 6
A
297 305anti-parallel
Strand 7
A
311 314anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 218first strand
Strand 2
A
384 394anti-parallel
Strand 3
A
242 248anti-parallel
Strand 4
A
271 276anti-parallel
Strand 5
A
297 305anti-parallel
Strand 6
A
327 329anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il