Analysis of interatomic Contacts of Structural Units in PDB entry:
8TBS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TBS entry

There are 3 chains in PDB entry 8TBS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 57	ILE 573
B	PHE 55	SER 574
C	LEU 51	THR 379

There are198 helices in PDB entry 8TBS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	60	65	Right-handed alpha
Helix 2	AA2	A	68	75	Right-handed alpha
Helix 3	AA3	A	95	99	Right-handed 310
Helix 4	AA4	A	100	111	Right-handed alpha
Helix 5	AA5	A	123	140	Right-handed alpha
Helix 6	AA6	A	144	148	Right-handed 310
Helix 7	AA7	A	265	278	Right-handed alpha
Helix 8	AA8	A	290	301	Right-handed alpha
Helix 9	AA9	A	316	322	Right-handed alpha
Helix 10	AB1	A	322	330	Right-handed alpha
Helix 11	AB2	A	337	344	Right-handed alpha
Helix 12	AB3	A	345	347	Right-handed 310
Helix 13	AB4	A	348	364	Right-handed alpha
Helix 14	AB5	A	374	379	Right-handed 310
Helix 15	AB6	A	384	398	Right-handed alpha
Helix 16	AB7	A	405	410	Right-handed alpha
Helix 17	AB8	A	413	431	Right-handed alpha
Helix 18	AB9	A	433	445	Right-handed alpha
Helix 19	AC1	A	450	467	Right-handed alpha
Helix 20	AC2	A	478	486	Right-handed alpha
Helix 21	AC3	A	499	506	Right-handed alpha
Helix 22	AC4	A	507	509	Right-handed 310
Helix 23	AC5	A	524	543	Right-handed alpha
Helix 24	AC6	B	60	65	Right-handed alpha
Helix 25	AC7	B	68	76	Right-handed alpha
Helix 26	AC8	B	100	111	Right-handed alpha
Helix 27	AC9	B	123	140	Right-handed alpha
Helix 28	AD1	B	189	194	Right-handed 310
Helix 29	AD2	B	204	208	Right-handed 310
Helix 30	AD3	B	265	278	Right-handed alpha
Helix 31	AD4	B	290	302	Right-handed alpha
Helix 32	AD5	B	316	322	Right-handed alpha
Helix 33	AD6	B	322	330	Right-handed alpha
Helix 34	AD7	B	337	344	Right-handed alpha
Helix 35	AD8	B	345	347	Right-handed 310
Helix 36	AD9	B	348	364	Right-handed alpha
Helix 37	AE1	B	374	379	Right-handed 310
Helix 38	AE2	B	384	398	Right-handed alpha
Helix 39	AE3	B	405	410	Right-handed alpha
Helix 40	AE4	B	413	431	Right-handed alpha
Helix 41	AE5	B	433	445	Right-handed alpha
Helix 42	AE6	B	450	467	Right-handed alpha
Helix 43	AE7	B	478	486	Right-handed alpha
Helix 44	AE8	B	499	506	Right-handed alpha
Helix 45	AE9	B	507	509	Right-handed 310
Helix 46	AF1	B	524	543	Right-handed alpha
Helix 47	AF2	C	52	57	Right-handed alpha
Helix 48	AF3	C	60	65	Right-handed alpha
Helix 49	AF4	C	68	76	Right-handed alpha
Helix 50	AF5	C	95	99	Right-handed 310
Helix 51	AF6	C	100	111	Right-handed alpha
Helix 52	AF7	C	123	140	Right-handed alpha
Helix 53	AF8	C	144	148	Right-handed 310
Helix 54	AF9	C	206	211	Right-handed alpha
Helix 55	AG1	C	265	278	Right-handed alpha
Helix 56	AG2	C	290	302	Right-handed alpha
Helix 57	AG3	C	316	322	Right-handed alpha
Helix 58	AG4	C	322	329	Right-handed alpha
Helix 59	AG5	C	337	344	Right-handed alpha
Helix 60	AG6	C	345	347	Right-handed 310
Helix 61	AG7	C	348	364	Right-handed alpha
Helix 62	AG8	C	374	379	Right-handed 310
Helix 63	AG9	C	384	398	Right-handed alpha
Helix 64	AH1	C	405	410	Right-handed alpha
Helix 65	AH2	C	413	431	Right-handed alpha
Helix 66	AH3	C	433	445	Right-handed alpha
Helix 67	AH4	C	450	467	Right-handed alpha
Helix 68	AH5	C	478	486	Right-handed alpha
Helix 69	AH6	C	499	506	Right-handed alpha
Helix 70	AH7	C	507	509	Right-handed 310
Helix 71	AH8	C	524	543	Right-handed alpha
Helix 72	AH9	D	60	65	Right-handed alpha
Helix 73	AI1	D	68	76	Right-handed alpha
Helix 74	AI2	D	95	99	Right-handed 310
Helix 75	AI3	D	100	111	Right-handed alpha
Helix 76	AI4	D	123	140	Right-handed alpha
Helix 77	AI5	D	206	211	Right-handed alpha
Helix 78	AI6	D	265	278	Right-handed alpha
Helix 79	AI7	D	290	302	Right-handed alpha
Helix 80	AI8	D	303	306	Right-handed 310
Helix 81	AI9	D	316	322	Right-handed alpha
Helix 82	AJ1	D	322	330	Right-handed alpha
Helix 83	AJ2	D	337	344	Right-handed alpha
Helix 84	AJ3	D	345	347	Right-handed 310
Helix 85	AJ4	D	348	364	Right-handed alpha
Helix 86	AJ5	D	374	379	Right-handed 310
Helix 87	AJ6	D	384	398	Right-handed alpha
Helix 88	AJ7	D	405	410	Right-handed alpha
Helix 89	AJ8	D	413	431	Right-handed alpha
Helix 90	AJ9	D	433	445	Right-handed alpha
Helix 91	AK1	D	450	467	Right-handed alpha
Helix 92	AK2	D	478	486	Right-handed alpha
Helix 93	AK3	D	499	506	Right-handed alpha
Helix 94	AK4	D	507	509	Right-handed 310
Helix 95	AK5	D	524	543	Right-handed alpha
Helix 96	AK6	E	52	57	Right-handed alpha
Helix 97	AK7	E	60	65	Right-handed alpha
Helix 98	AK8	E	68	75	Right-handed alpha
Helix 99	AK9	E	95	99	Right-handed 310
Helix 100	AL1	E	100	111	Right-handed alpha
Helix 101	AL2	E	123	140	Right-handed alpha
Helix 102	AL3	E	188	194	Right-handed 310
Helix 103	AL4	E	206	211	Right-handed alpha
Helix 104	AL5	E	265	279	Right-handed alpha
Helix 105	AL6	E	290	302	Right-handed alpha
Helix 106	AL7	E	303	306	Right-handed 310
Helix 107	AL8	E	316	322	Right-handed alpha
Helix 108	AL9	E	322	330	Right-handed alpha
Helix 109	AM1	E	337	344	Right-handed alpha
Helix 110	AM2	E	345	347	Right-handed 310
Helix 111	AM3	E	348	364	Right-handed alpha
Helix 112	AM4	E	374	379	Right-handed 310
Helix 113	AM5	E	384	398	Right-handed alpha
Helix 114	AM6	E	405	410	Right-handed alpha
Helix 115	AM7	E	413	431	Right-handed alpha
Helix 116	AM8	E	433	445	Right-handed alpha
Helix 117	AM9	E	450	467	Right-handed alpha
Helix 118	AN1	E	478	486	Right-handed alpha
Helix 119	AN2	E	499	506	Right-handed alpha
Helix 120	AN3	E	507	509	Right-handed 310
Helix 121	AN4	E	524	543	Right-handed alpha
Helix 122	AN5	F	54	58	Right-handed 310
Helix 123	AN6	F	60	65	Right-handed alpha
Helix 124	AN7	F	68	75	Right-handed alpha
Helix 125	AN8	F	95	99	Right-handed 310
Helix 126	AN9	F	100	111	Right-handed alpha
Helix 127	AO1	F	123	140	Right-handed alpha
Helix 128	AO2	F	188	192	Right-handed 310
Helix 129	AO3	F	204	210	Right-handed 310
Helix 130	AO4	F	265	278	Right-handed alpha
Helix 131	AO5	F	290	302	Right-handed alpha
Helix 132	AO6	F	303	306	Right-handed 310
Helix 133	AO7	F	316	322	Right-handed alpha
Helix 134	AO8	F	322	330	Right-handed alpha
Helix 135	AO9	F	337	344	Right-handed alpha
Helix 136	AP1	F	345	347	Right-handed 310
Helix 137	AP2	F	348	364	Right-handed alpha
Helix 138	AP3	F	374	379	Right-handed 310
Helix 139	AP4	F	384	398	Right-handed alpha
Helix 140	AP5	F	405	410	Right-handed alpha
Helix 141	AP6	F	413	431	Right-handed alpha
Helix 142	AP7	F	433	445	Right-handed alpha
Helix 143	AP8	F	450	467	Right-handed alpha
Helix 144	AP9	F	478	486	Right-handed alpha
Helix 145	AQ1	F	499	506	Right-handed alpha
Helix 146	AQ2	F	507	509	Right-handed 310
Helix 147	AQ3	F	524	543	Right-handed alpha
Helix 148	AQ4	G	54	58	Right-handed 310
Helix 149	AQ5	G	60	65	Right-handed alpha
Helix 150	AQ6	G	68	76	Right-handed alpha
Helix 151	AQ7	G	95	99	Right-handed 310
Helix 152	AQ8	G	100	111	Right-handed alpha
Helix 153	AQ9	G	123	140	Right-handed alpha
Helix 154	AR1	G	144	148	Right-handed 310
Helix 155	AR2	G	188	192	Right-handed 310
Helix 156	AR3	G	206	211	Right-handed alpha
Helix 157	AR4	G	265	278	Right-handed alpha
Helix 158	AR5	G	290	302	Right-handed alpha
Helix 159	AR6	G	303	306	Right-handed 310
Helix 160	AR7	G	316	322	Right-handed alpha
Helix 161	AR8	G	322	330	Right-handed alpha
Helix 162	AR9	G	337	344	Right-handed alpha
Helix 163	AS1	G	345	347	Right-handed 310
Helix 164	AS2	G	348	364	Right-handed alpha
Helix 165	AS3	G	374	379	Right-handed 310
Helix 166	AS4	G	384	398	Right-handed alpha
Helix 167	AS5	G	405	410	Right-handed alpha
Helix 168	AS6	G	413	431	Right-handed alpha
Helix 169	AS7	G	433	445	Right-handed alpha
Helix 170	AS8	G	450	467	Right-handed alpha
Helix 171	AS9	G	478	486	Right-handed alpha
Helix 172	AT1	G	499	506	Right-handed alpha
Helix 173	AT2	G	507	509	Right-handed 310
Helix 174	AT3	G	524	543	Right-handed alpha
Helix 175	AT4	H	60	65	Right-handed alpha
Helix 176	AT5	H	68	75	Right-handed alpha
Helix 177	AT6	H	100	111	Right-handed alpha
Helix 178	AT7	H	123	140	Right-handed alpha
Helix 179	AT8	H	188	192	Right-handed 310
Helix 180	AT9	H	204	210	Right-handed 310
Helix 181	AU1	H	265	278	Right-handed alpha
Helix 182	AU2	H	290	302	Right-handed alpha
Helix 183	AU3	H	303	306	Right-handed 310
Helix 184	AU4	H	316	322	Right-handed alpha
Helix 185	AU5	H	322	330	Right-handed alpha
Helix 186	AU6	H	337	344	Right-handed alpha
Helix 187	AU7	H	345	347	Right-handed 310
Helix 188	AU8	H	348	364	Right-handed alpha
Helix 189	AU9	H	374	379	Right-handed 310
Helix 190	AV1	H	384	398	Right-handed alpha
Helix 191	AV2	H	405	410	Right-handed alpha
Helix 192	AV3	H	413	431	Right-handed alpha
Helix 193	AV4	H	433	445	Right-handed alpha
Helix 194	AV5	H	450	467	Right-handed alpha
Helix 195	AV6	H	478	486	Right-handed alpha
Helix 196	AV7	H	499	506	Right-handed alpha
Helix 197	AV8	H	507	509	Right-handed 310
Helix 198	AV9	H	524	543	Right-handed alpha

There are 25 sheets in PDB entry 8TBS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	93	first strand
Strand 2	A	114	118	parallel
Strand 3	A	152	156	parallel
Strand 4	A	282	285	parallel
Strand 5	A	309	314	parallel
Strand 6	A	332	336	parallel
Strand 7	A	367	370	parallel
Strand 8	A	401	404	parallel
Strand 9	A	89	93	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	186	first strand
Strand 2	A	199	201	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	227	first strand
Strand 2	A	216	219	anti-parallel
Strand 3	A	252	253	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	512	516	first strand
Strand 2	A	492	497	parallel
Strand 3	A	470	474	parallel
Strand 4	A	551	557	parallel
Strand 5	A	565	572	anti-parallel
Strand 6	C	565	572	anti-parallel
Strand 7	C	551	557	anti-parallel
Strand 8	C	470	474	parallel
Strand 9	C	492	497	parallel
Strand 10	C	512	516	parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	93	first strand
Strand 2	B	112	118	parallel
Strand 3	B	152	156	parallel
Strand 4	B	282	285	parallel
Strand 5	B	309	314	parallel
Strand 6	B	332	336	parallel
Strand 7	B	367	370	parallel
Strand 8	B	401	404	parallel
Strand 9	B	89	93	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	177	first strand
Strand 2	B	244	246	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	201	first strand
Strand 2	B	182	186	parallel
Strand 3	B	236	242	anti-parallel
Strand 4	B	224	231	anti-parallel
Strand 5	B	216	219	anti-parallel
Strand 6	B	252	253	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	512	516	first strand
Strand 2	B	492	497	parallel
Strand 3	B	470	474	parallel
Strand 4	B	551	557	parallel
Strand 5	B	565	572	anti-parallel
Strand 6	D	565	572	anti-parallel
Strand 7	D	551	557	anti-parallel
Strand 8	D	470	474	parallel
Strand 9	D	492	497	parallel
Strand 10	D	512	516	parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	93	first strand
Strand 2	C	114	118	parallel
Strand 3	C	152	156	parallel
Strand 4	C	282	285	parallel
Strand 5	C	309	314	parallel
Strand 6	C	332	336	parallel
Strand 7	C	367	370	parallel
Strand 8	C	401	404	parallel
Strand 9	C	89	93	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	176	first strand
Strand 2	C	245	246	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	199	201	first strand
Strand 2	C	182	186	parallel
Strand 3	C	236	242	anti-parallel
Strand 4	C	224	227	anti-parallel
Strand 5	C	216	219	anti-parallel
Strand 6	C	252	253	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	93	first strand
Strand 2	D	114	118	parallel
Strand 3	D	152	156	parallel
Strand 4	D	282	285	parallel
Strand 5	D	309	314	parallel
Strand 6	D	332	336	parallel
Strand 7	D	367	370	parallel
Strand 8	D	401	404	parallel
Strand 9	D	89	93	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	239	242	first strand
Strand 2	D	224	227	anti-parallel
Strand 3	D	217	219	anti-parallel
Strand 4	D	252	253	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	89	93	first strand
Strand 2	E	114	118	parallel
Strand 3	E	152	156	parallel
Strand 4	E	282	285	parallel
Strand 5	E	309	314	parallel
Strand 6	E	332	336	parallel
Strand 7	E	367	370	parallel
Strand 8	E	401	404	parallel
Strand 9	E	89	93	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	199	201	first strand
Strand 2	E	182	186	parallel
Strand 3	E	236	242	anti-parallel
Strand 4	E	224	226	anti-parallel
Strand 5	E	217	219	anti-parallel
Strand 6	E	252	253	anti-parallel

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There are 10 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	512	516	first strand
Strand 2	E	492	497	parallel
Strand 3	E	470	474	parallel
Strand 4	E	551	557	parallel
Strand 5	E	565	572	anti-parallel
Strand 6	H	565	572	anti-parallel
Strand 7	H	551	557	anti-parallel
Strand 8	H	470	474	parallel
Strand 9	H	492	497	parallel
Strand 10	H	512	516	parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	89	93	first strand
Strand 2	F	112	118	parallel
Strand 3	F	152	156	parallel
Strand 4	F	282	285	parallel
Strand 5	F	309	314	parallel
Strand 6	F	332	336	parallel
Strand 7	F	367	370	parallel
Strand 8	F	401	404	parallel
Strand 9	F	89	93	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	175	177	first strand
Strand 2	F	244	246	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	199	201	first strand
Strand 2	F	182	186	parallel
Strand 3	F	235	242	anti-parallel
Strand 4	F	224	232	anti-parallel
Strand 5	F	216	219	anti-parallel
Strand 6	F	252	253	anti-parallel

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There are 10 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	512	516	first strand
Strand 2	F	492	497	parallel
Strand 3	F	470	474	parallel
Strand 4	F	551	557	parallel
Strand 5	F	565	572	anti-parallel
Strand 6	G	565	572	anti-parallel
Strand 7	G	551	557	anti-parallel
Strand 8	G	470	474	parallel
Strand 9	G	492	497	parallel
Strand 10	G	512	516	parallel

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There are 9 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	89	93	first strand
Strand 2	G	112	118	parallel
Strand 3	G	152	156	parallel
Strand 4	G	282	285	parallel
Strand 5	G	309	314	parallel
Strand 6	G	332	336	parallel
Strand 7	G	367	370	parallel
Strand 8	G	401	404	parallel
Strand 9	G	89	93	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	162	163	first strand
Strand 2	G	251	253	anti-parallel
Strand 3	G	218	219	anti-parallel
Strand 4	G	224	225	anti-parallel

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There are 9 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	89	93	first strand
Strand 2	H	112	118	parallel
Strand 3	H	152	156	parallel
Strand 4	H	282	285	parallel
Strand 5	H	309	314	parallel
Strand 6	H	332	336	parallel
Strand 7	H	367	370	parallel
Strand 8	H	401	404	parallel
Strand 9	H	89	93	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	175	177	first strand
Strand 2	H	244	246	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	199	201	first strand
Strand 2	H	182	186	parallel
Strand 3	H	235	242	anti-parallel
Strand 4	H	224	232	anti-parallel
Strand 5	H	216	219	anti-parallel
Strand 6	H	252	253	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TBS

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TBS