Analysis of interatomic Contacts of Structural Units in PDB entry:
8TBX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TBX entry

There is 1 chain in PDB entry 8TBX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0VAL 673
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8TBX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 6Right-handed alpha
Helix 2
AA2
A
10 19Right-handed alpha
Helix 3
AA3
A
26 38Right-handed alpha
Helix 4
AA4
A
51 69Right-handed alpha
Helix 5
AA5
A
295 310Right-handed alpha
Helix 6
AA6
A
328 339Right-handed alpha
Helix 7
AA7
A
346 355Right-handed alpha
Helix 8
AA8
A
371 378Right-handed alpha
Helix 9
AA9
A
380 391Right-handed alpha
Helix 10
AB1
A
412 423Right-handed alpha
Helix 11
AB2
A
454 459Right-handed 310
Helix 12
AB3
A
481 505Right-handed alpha
Helix 13
AB4
A
515 529Right-handed alpha
Helix 14
AB5
A
550 563Right-handed alpha
Helix 15
AB6
A
572 579Right-handed alpha
Helix 16
AB7
A
596 604Right-handed alpha
Helix 17
AB8
A
643 647Right-handed 310
Helix 18
AB9
A
654 666Right-handed alpha
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There are 3 sheets in PDB entry 8TBX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 323first strand
Strand 2
A
342 345parallel
Strand 3
A
289 292parallel
Strand 4
A
366 369parallel
Strand 5
A
402 407parallel
Strand 6
A
42 45parallel
Strand 7
A
427 429parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 448first strand
Strand 2
A
613 620parallel
Strand 3
A
586 589parallel
Strand 4
A
509 512parallel
Strand 5
A
568 571parallel
Strand 6
A
542 545parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
624 627first strand
Strand 2
A
650 653anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il