Analysis of interatomic Contacts of Structural Units in PDB entry:
8TC0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TC0 entry

There are 3 chains in PDB entry 8TC0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 5	GLU 1113
B	LYS 5	GLU 1113
C	LYS 5	GLU 1113

There are 72 helices in PDB entry 8TC0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	268	278	Right-handed alpha
Helix 2	AA2	A	311	317	Right-handed alpha
Helix 3	AA3	A	338	345	Right-handed 310
Helix 4	AA4	A	357	363	Right-handed 310
Helix 5	AA5	A	378	382	Right-handed alpha
Helix 6	AA6	A	390	396	Right-handed alpha
Helix 7	AA7	A	412	417	Right-handed alpha
Helix 8	AA8	A	475	478	Right-handed 310
Helix 9	AA9	A	706	713	Right-handed alpha
Helix 10	AB1	A	715	726	Right-handed alpha
Helix 11	AB2	A	728	752	Right-handed alpha
Helix 12	AB3	A	772	775	Right-handed 310
Helix 13	AB4	A	785	795	Right-handed alpha
Helix 14	AB5	A	805	812	Right-handed alpha
Helix 15	AB6	A	817	824	Right-handed alpha
Helix 16	AB7	A	835	853	Right-handed alpha
Helix 17	AB8	A	855	859	Right-handed 310
Helix 18	AB9	A	866	878	Right-handed alpha
Helix 19	AC1	A	881	888	Right-handed alpha
Helix 20	AC2	A	888	909	Right-handed alpha
Helix 21	AC3	A	914	934	Right-handed alpha
Helix 22	AC4	A	935	937	Right-handed 310
Helix 23	AC5	A	945	953	Right-handed alpha
Helix 24	AC6	A	954	1002	Right-handed alpha
Helix 25	AC7	B	268	278	Right-handed alpha
Helix 26	AC8	B	311	317	Right-handed alpha
Helix 27	AC9	B	338	345	Right-handed 310
Helix 28	AD1	B	357	363	Right-handed 310
Helix 29	AD2	B	378	382	Right-handed alpha
Helix 30	AD3	B	390	396	Right-handed alpha
Helix 31	AD4	B	412	417	Right-handed alpha
Helix 32	AD5	B	475	478	Right-handed 310
Helix 33	AD6	B	706	713	Right-handed alpha
Helix 34	AD7	B	715	726	Right-handed alpha
Helix 35	AD8	B	728	752	Right-handed alpha
Helix 36	AD9	B	772	775	Right-handed 310
Helix 37	AE1	B	785	795	Right-handed alpha
Helix 38	AE2	B	805	812	Right-handed alpha
Helix 39	AE3	B	817	824	Right-handed alpha
Helix 40	AE4	B	835	853	Right-handed alpha
Helix 41	AE5	B	855	859	Right-handed 310
Helix 42	AE6	B	866	877	Right-handed alpha
Helix 43	AE7	B	881	888	Right-handed alpha
Helix 44	AE8	B	888	908	Right-handed alpha
Helix 45	AE9	B	914	934	Right-handed alpha
Helix 46	AF1	B	935	937	Right-handed 310
Helix 47	AF2	B	945	953	Right-handed alpha
Helix 48	AF3	B	954	1001	Right-handed alpha
Helix 49	AF4	C	268	278	Right-handed alpha
Helix 50	AF5	C	311	317	Right-handed alpha
Helix 51	AF6	C	323	327	Right-handed 310
Helix 52	AF7	C	338	345	Right-handed 310
Helix 53	AF8	C	357	363	Right-handed 310
Helix 54	AF9	C	378	382	Right-handed alpha
Helix 55	AG1	C	390	396	Right-handed alpha
Helix 56	AG2	C	412	417	Right-handed alpha
Helix 57	AG3	C	475	478	Right-handed 310
Helix 58	AG4	C	706	713	Right-handed alpha
Helix 59	AG5	C	715	726	Right-handed alpha
Helix 60	AG6	C	728	752	Right-handed alpha
Helix 61	AG7	C	772	775	Right-handed 310
Helix 62	AG8	C	785	795	Right-handed alpha
Helix 63	AG9	C	805	812	Right-handed alpha
Helix 64	AH1	C	817	824	Right-handed alpha
Helix 65	AH2	C	835	853	Right-handed alpha
Helix 66	AH3	C	866	877	Right-handed alpha
Helix 67	AH4	C	881	888	Right-handed alpha
Helix 68	AH5	C	888	909	Right-handed alpha
Helix 69	AH6	C	914	934	Right-handed alpha
Helix 70	AH7	C	935	937	Right-handed 310
Helix 71	AH8	C	945	953	Right-handed alpha
Helix 72	AH9	C	954	1002	Right-handed alpha

There are 50 sheets in PDB entry 8TC0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	21	first strand
Strand 2	A	52	59	anti-parallel
Strand 3	A	62	63	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	21	first strand
Strand 2	A	52	59	anti-parallel
Strand 3	A	237	243	anti-parallel
Strand 4	A	74	80	anti-parallel
Strand 5	A	166	177	anti-parallel
Strand 6	A	180	192	anti-parallel
Strand 7	A	204	209	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	46	first strand
Strand 2	A	245	253	anti-parallel
Strand 3	A	259	264	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	217	224	anti-parallel
Strand 3	A	124	128	parallel
Strand 4	A	133	135	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	217	224	anti-parallel
Strand 3	A	87	91	anti-parallel
Strand 4	A	100	105	anti-parallel
Strand 5	A	110	115	anti-parallel
Strand 6	A	148	151	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	119	first strand
Strand 2	A	140	143	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	285	288	first strand
Strand 2	A	568	572	anti-parallel
Strand 3	A	582	585	anti-parallel
Strand 4	A	621	624	anti-parallel
Strand 5	A	616	618	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	298	302	first strand
Strand 2	A	512	516	parallel
Strand 3	A	519	527	anti-parallel
Strand 4	A	557	561	anti-parallel
Strand 5	A	546	550	anti-parallel
Strand 6	A	538	540	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	328	332	first strand
Strand 2	A	365	377	anti-parallel
Strand 3	A	497	498	anti-parallel
Strand 4	A	335	336	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	328	332	first strand
Strand 2	A	365	377	anti-parallel
Strand 3	A	480	489	anti-parallel
Strand 4	A	405	411	anti-parallel
Strand 5	A	350	354	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	426	428	first strand
Strand 2	A	465	467	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	627	628	first strand
Strand 2	A	659	665	parallel
Strand 3	A	643	649	anti-parallel
Strand 4	A	637	640	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	670	672	first strand
Strand 2	C	756	758	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	680	697	first strand
Strand 2	A	1028	1047	anti-parallel
Strand 3	A	1022	1025	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1016	1019	first strand
Strand 2	A	1028	1047	anti-parallel
Strand 3	A	1063	1066	anti-parallel
Strand 4	A	1071	1074	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	705	first strand
Strand 2	A	827	830	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	765	766	first strand
Strand 2	A	769	770	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1089	1094	first strand
Strand 2	A	1055	1059	anti-parallel
Strand 3	A	1050	1052	anti-parallel
Strand 4	A	1102	1103	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	21	first strand
Strand 2	B	52	59	anti-parallel
Strand 3	B	62	63	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	21	first strand
Strand 2	B	52	59	anti-parallel
Strand 3	B	237	243	anti-parallel
Strand 4	B	74	80	anti-parallel
Strand 5	B	166	177	anti-parallel
Strand 6	B	180	192	anti-parallel
Strand 7	B	204	209	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	46	first strand
Strand 2	B	245	253	anti-parallel
Strand 3	B	259	264	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	69	first strand
Strand 2	B	217	224	anti-parallel
Strand 3	B	117	128	parallel
Strand 4	B	133	143	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	69	first strand
Strand 2	B	217	224	anti-parallel
Strand 3	B	87	91	anti-parallel
Strand 4	B	100	105	anti-parallel
Strand 5	B	110	115	anti-parallel
Strand 6	B	148	151	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	285	288	first strand
Strand 2	B	568	572	anti-parallel
Strand 3	B	582	585	anti-parallel
Strand 4	B	621	624	anti-parallel
Strand 5	B	616	618	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	302	first strand
Strand 2	B	512	516	parallel
Strand 3	B	519	527	anti-parallel
Strand 4	B	557	561	anti-parallel
Strand 5	B	546	550	anti-parallel
Strand 6	B	538	540	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	328	332	first strand
Strand 2	B	365	377	anti-parallel
Strand 3	B	497	498	anti-parallel
Strand 4	B	335	336	parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	328	332	first strand
Strand 2	B	365	377	anti-parallel
Strand 3	B	480	489	anti-parallel
Strand 4	B	405	411	anti-parallel
Strand 5	B	350	354	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	426	428	first strand
Strand 2	B	465	467	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	627	628	first strand
Strand 2	B	659	665	parallel
Strand 3	B	643	649	anti-parallel
Strand 4	B	637	640	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	680	697	first strand
Strand 2	B	1028	1046	anti-parallel
Strand 3	B	1016	1025	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	680	697	first strand
Strand 2	B	1028	1046	anti-parallel
Strand 3	B	1063	1066	anti-parallel
Strand 4	B	1071	1074	anti-parallel
Strand 5	B	1082	1083	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	702	705	first strand
Strand 2	B	827	830	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	765	766	first strand
Strand 2	B	769	770	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1090	1091	first strand
Strand 2	B	1055	1058	anti-parallel
Strand 3	B	1050	1052	anti-parallel
Strand 4	B	1102	1103	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	21	first strand
Strand 2	C	52	59	anti-parallel
Strand 3	C	62	63	anti-parallel

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There are 7 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	21	first strand
Strand 2	C	52	59	anti-parallel
Strand 3	C	237	243	anti-parallel
Strand 4	C	74	80	anti-parallel
Strand 5	C	166	177	anti-parallel
Strand 6	C	180	192	anti-parallel
Strand 7	C	204	209	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	46	first strand
Strand 2	C	245	253	anti-parallel
Strand 3	C	259	264	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	69	first strand
Strand 2	C	217	224	anti-parallel
Strand 3	C	117	128	parallel
Strand 4	C	133	143	anti-parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	69	first strand
Strand 2	C	217	224	anti-parallel
Strand 3	C	87	91	anti-parallel
Strand 4	C	100	105	anti-parallel
Strand 5	C	110	115	anti-parallel
Strand 6	C	148	151	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	288	first strand
Strand 2	C	568	572	anti-parallel
Strand 3	C	582	585	anti-parallel
Strand 4	C	621	624	anti-parallel
Strand 5	C	616	618	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	298	302	first strand
Strand 2	C	512	516	parallel
Strand 3	C	519	527	anti-parallel
Strand 4	C	557	561	anti-parallel
Strand 5	C	546	550	anti-parallel
Strand 6	C	538	540	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	332	first strand
Strand 2	C	365	377	anti-parallel
Strand 3	C	497	498	anti-parallel
Strand 4	C	335	336	parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	332	first strand
Strand 2	C	365	377	anti-parallel
Strand 3	C	480	489	anti-parallel
Strand 4	C	405	411	anti-parallel
Strand 5	C	350	354	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	426	428	first strand
Strand 2	C	465	467	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	627	628	first strand
Strand 2	C	659	665	parallel
Strand 3	C	643	649	anti-parallel
Strand 4	C	637	640	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	680	697	first strand
Strand 2	C	1028	1047	anti-parallel
Strand 3	C	1022	1025	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1016	1019	first strand
Strand 2	C	1028	1047	anti-parallel
Strand 3	C	1063	1066	anti-parallel
Strand 4	C	1071	1074	anti-parallel
Strand 5	C	1082	1083	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	702	705	first strand
Strand 2	C	827	830	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	765	766	first strand
Strand 2	C	769	770	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1090	1094	first strand
Strand 2	C	1055	1058	anti-parallel
Strand 3	C	1050	1052	anti-parallel
Strand 4	C	1102	1103	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TC0

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TC0