Analysis of interatomic Contacts of Structural Units in PDB entry:
8TCH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TCH entry

There are 2 chains in PDB entry 8TCH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 23ASN 561
B
 ILE 26LYS 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 8TCH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
97 102Right-handed alpha
Helix 2
AA2
A
102 107Right-handed alpha
Helix 3
AA3
A
108 113Right-handed 310
Helix 4
AA4
A
120 135Right-handed alpha
Helix 5
AA5
A
157 165Right-handed alpha
Helix 6
AA6
A
172 183Right-handed alpha
Helix 7
AA7
A
188 195Right-handed alpha
Helix 8
AA8
A
196 200Right-handed 310
Helix 9
AA9
A
202 215Right-handed alpha
Helix 10
AB1
A
217 222Right-handed alpha
Helix 11
AB2
A
238 247Right-handed alpha
Helix 12
AB3
A
265 273Right-handed alpha
Helix 13
AB4
A
281 285Right-handed 310
Helix 14
AB5
A
286 299Right-handed alpha
Helix 15
AB6
A
359 368Right-handed alpha
Helix 16
AB7
A
371 383Right-handed alpha
Helix 17
AB8
A
383 399Right-handed alpha
Helix 18
AB9
A
405 410Right-handed alpha
Helix 19
AC1
A
410 427Right-handed alpha
Helix 20
AC2
A
428 431Right-handed 310
Helix 21
AC3
A
433 449Right-handed alpha
Helix 22
AC4
A
450 452Right-handed 310
Helix 23
AC5
A
453 468Right-handed alpha
Helix 24
AC6
A
469 471Right-handed 310
Helix 25
AC7
A
499 507Right-handed alpha
Helix 26
AC8
A
509 520Right-handed alpha
Helix 27
AC9
A
549 555Right-handed alpha
Helix 28
AD1
B
97 102Right-handed alpha
Helix 29
AD2
B
102 107Right-handed alpha
Helix 30
AD3
B
108 113Right-handed 310
Helix 31
AD4
B
120 135Right-handed alpha
Helix 32
AD5
B
157 165Right-handed alpha
Helix 33
AD6
B
172 183Right-handed alpha
Helix 34
AD7
B
190 195Right-handed alpha
Helix 35
AD8
B
196 200Right-handed 310
Helix 36
AD9
B
202 215Right-handed alpha
Helix 37
AE1
B
216 222Right-handed 310
Helix 38
AE2
B
238 247Right-handed alpha
Helix 39
AE3
B
265 273Right-handed alpha
Helix 40
AE4
B
281 285Right-handed 310
Helix 41
AE5
B
286 299Right-handed alpha
Helix 42
AE6
B
359 368Right-handed alpha
Helix 43
AE7
B
371 383Right-handed alpha
Helix 44
AE8
B
383 399Right-handed alpha
Helix 45
AE9
B
405 410Right-handed alpha
Helix 46
AF1
B
410 426Right-handed alpha
Helix 47
AF2
B
433 449Right-handed alpha
Helix 48
AF3
B
450 452Right-handed 310
Helix 49
AF4
B
453 468Right-handed alpha
Helix 50
AF5
B
469 471Right-handed 310
Helix 51
AF6
B
499 507Right-handed alpha
Helix 52
AF7
B
509 520Right-handed alpha
Helix 53
AF8
B
549 555Right-handed alpha
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There are 10 sheets in PDB entry 8TCH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
38 45anti-parallel
Strand 3
A
55 60anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 96first strand
Strand 2
A
78 85anti-parallel
Strand 3
A
65 72anti-parallel
Strand 4
A
138 143parallel
Strand 5
A
167 168parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
153 154anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 257first strand
Strand 2
A
277 280parallel
Strand 3
A
321 324parallel
Strand 4
A
226 230parallel
Strand 5
A
344 347parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 475first strand
Strand 2
A
488 490parallel
Strand 3
A
494 498anti-parallel
Strand 4
A
540 548anti-parallel
Strand 5
A
533 537anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 33first strand
Strand 2
B
40 45anti-parallel
Strand 3
B
55 60anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 96first strand
Strand 2
B
78 85anti-parallel
Strand 3
B
65 72anti-parallel
Strand 4
B
138 143parallel
Strand 5
B
167 168parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 148first strand
Strand 2
B
153 154anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 257first strand
Strand 2
B
277 280parallel
Strand 3
B
321 324parallel
Strand 4
B
226 230parallel
Strand 5
B
344 347parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 475first strand
Strand 2
B
488 491parallel
Strand 3
B
494 498anti-parallel
Strand 4
B
540 548anti-parallel
Strand 5
B
533 537anti-parallel
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