Analysis of interatomic Contacts of Structural Units in PDB entry:
8TCT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TCT entry

There is 1 chain in PDB entry 8TCT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 30LYS 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8TCT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 46Right-handed alpha
Helix 2
AA2
A
56 70Right-handed alpha
Helix 3
AA3
A
88 99Right-handed alpha
Helix 4
AA4
A
113 120Right-handed alpha
Helix 5
AA5
A
122 139Right-handed alpha
Helix 6
AA6
A
154 175Right-handed alpha
Helix 7
AA7
A
185 188Right-handed 310
Helix 8
AA8
A
196 203Right-handed alpha
Helix 9
AA9
A
215 221Right-handed alpha
Helix 10
AB1
A
224 232Right-handed alpha
Helix 11
AB2
A
254 261Right-handed alpha
Helix 12
AB3
A
261 266Right-handed alpha
Helix 13
AB4
A
280 295Right-handed alpha
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There are 2 sheets in PDB entry 8TCT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 106first strand
Strand 2
A
73 76parallel
Strand 3
A
35 37parallel
Strand 4
A
269 272parallel
Strand 5
A
238 241parallel
Strand 6
A
210 214parallel
Strand 7
A
178 182parallel
Strand 8
A
143 146parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 191first strand
Strand 2
A
194 195anti-parallel
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