Analysis of interatomic Contacts of Structural Units in PDB entry:
8TEE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TEE entry

There are 4 chains in PDB entry 8TEE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 14VAL 680
B
 LEU 3TRP 679
C
 ALA 786GLY 797
D
 ALA 786GLU 796
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 8TEE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 52Right-handed alpha
Helix 2
AA2
A
78 83Right-handed alpha
Helix 3
AA3
A
118 130Right-handed alpha
Helix 4
AA4
A
134 136Right-handed 310
Helix 5
AA5
A
229 237Right-handed alpha
Helix 6
AA6
A
241 249Right-handed alpha
Helix 7
AA7
A
250 252Right-handed 310
Helix 8
AA8
A
259 263Right-handed 310
Helix 9
AA9
A
287 304Right-handed alpha
Helix 10
AB1
A
310 331Right-handed alpha
Helix 11
AB2
A
517 521Right-handed 310
Helix 12
AB3
A
523 530Right-handed alpha
Helix 13
AB4
A
531 564Right-handed alpha
Helix 14
AB5
A
639 658Right-handed alpha
Helix 15
AB6
A
668 677Right-handed alpha
Helix 16
AB7
B
40 52Right-handed alpha
Helix 17
AB8
B
118 131Right-handed alpha
Helix 18
AB9
B
134 136Right-handed 310
Helix 19
AC1
B
218 223Right-handed 310
Helix 20
AC2
B
229 237Right-handed alpha
Helix 21
AC3
B
241 249Right-handed alpha
Helix 22
AC4
B
250 252Right-handed 310
Helix 23
AC5
B
259 263Right-handed 310
Helix 24
AC6
B
287 304Right-handed alpha
Helix 25
AC7
B
310 334Right-handed alpha
Helix 26
AC8
B
523 530Right-handed alpha
Helix 27
AC9
B
531 564Right-handed alpha
Helix 28
AD1
B
639 658Right-handed alpha
Helix 29
AD2
B
668 676Right-handed alpha
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There are 6 sheets in PDB entry 8TEE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 33first strand
Strand 2
A
20 24anti-parallel
Strand 3
A
89 94parallel
Strand 4
A
61 65anti-parallel
Strand 5
A
70 71anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 142first strand
Strand 2
A
269 274anti-parallel
Strand 3
A
96 102parallel
Strand 4
A
108 114anti-parallel
Strand 5
A
201 202parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
603 608first strand
Strand 2
A
592 596anti-parallel
Strand 3
A
584 588anti-parallel
Strand 4
A
571 577anti-parallel
Strand 5
A
634 637anti-parallel
Strand 6
A
623 628anti-parallel
Strand 7
A
612 618anti-parallel
Strand 8
C
787 790anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 35first strand
Strand 2
B
18 24anti-parallel
Strand 3
B
90 94parallel
Strand 4
B
61 65anti-parallel
Strand 5
B
70 72anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 114first strand
Strand 2
B
96 102anti-parallel
Strand 3
B
269 274parallel
Strand 4
B
138 142anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
603 608first strand
Strand 2
B
592 597anti-parallel
Strand 3
B
584 588anti-parallel
Strand 4
B
571 577anti-parallel
Strand 5
B
634 637anti-parallel
Strand 6
B
623 628anti-parallel
Strand 7
B
612 618anti-parallel
Strand 8
D
787 791anti-parallel
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