Analysis of interatomic Contacts of Structural Units in PDB entry:
8TEG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TEG entry

There are 2 chains in PDB entry 8TEG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 5ILE 630
B
 TYR 624THR 645
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8TEG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 20Right-handed alpha
Helix 2
AA2
A
21 31Right-handed alpha
Helix 3
AA3
A
32 35Right-handed 310
Helix 4
AA4
A
36 62Right-handed alpha
Helix 5
AA5
A
67 86Right-handed alpha
Helix 6
AA6
A
96 112Right-handed alpha
Helix 7
AA7
A
120 142Right-handed alpha
Helix 8
AA8
A
143 151Right-handed 310
Helix 9
AA9
A
152 178Right-handed alpha
Helix 10
AB1
A
189 192Right-handed 310
Helix 11
AB2
A
193 219Right-handed alpha
Helix 12
AB3
A
220 224Right-handed 310
Helix 13
AB4
A
228 252Right-handed alpha
Helix 14
AB5
A
253 258Right-handed 310
Helix 15
AB6
A
282 287Right-handed alpha
Helix 16
AB7
A
290 297Right-handed alpha
Helix 17
AB8
A
297 320Right-handed alpha
Helix 18
AB9
A
321 325Right-handed 310
Helix 19
AC1
A
331 350Right-handed alpha
Helix 20
AC2
A
359 368Right-handed alpha
Helix 21
AC3
A
464 480Right-handed alpha
Helix 22
AC4
A
480 485Right-handed alpha
Helix 23
AC5
A
488 503Right-handed alpha
Helix 24
AC6
A
507 517Right-handed alpha
Helix 25
AC7
A
519 521Right-handed 310
Helix 26
AC8
A
522 528Right-handed alpha
Helix 27
AC9
A
533 538Right-handed alpha
Helix 28
AD1
A
539 561Right-handed alpha
Helix 29
AD2
A
565 568Right-handed 310
Helix 30
AD3
A
569 584Right-handed alpha
Helix 31
AD4
A
584 589Right-handed alpha
Helix 32
AD5
A
591 598Right-handed alpha
Helix 33
AD6
A
609 614Right-handed alpha
Helix 34
AD7
B
626 635Right-handed alpha
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There are 3 sheets in PDB entry 8TEG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
355 356anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
A
458 460anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
531 532first strand
Strand 2
A
602 605anti-parallel
Strand 3
B
643 644parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il