Analysis of interatomic Contacts of Structural Units in PDB entry:
8TEJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TEJ entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 2 chains in PDB entry 8TEJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 5GLN 409
A
 PRO 411LEU 516
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8TEJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 19Right-handed alpha
Helix 2
AA2
A
21 32Right-handed alpha
Helix 3
AA3
A
33 35Right-handed 310
Helix 4
AA4
A
36 62Right-handed alpha
Helix 5
AA5
A
67 86Right-handed alpha
Helix 6
AA6
A
96 112Right-handed alpha
Helix 7
AA7
A
120 142Right-handed alpha
Helix 8
AA8
A
145 151Right-handed alpha
Helix 9
AA9
A
152 178Right-handed alpha
Helix 10
AB1
A
189 192Right-handed 310
Helix 11
AB2
A
193 219Right-handed alpha
Helix 12
AB3
A
220 224Right-handed 310
Helix 13
AB4
A
228 251Right-handed alpha
Helix 14
AB5
A
252 257Right-handed 310
Helix 15
AB6
A
282 287Right-handed alpha
Helix 16
AB7
A
292 297Right-handed alpha
Helix 17
AB8
A
297 319Right-handed alpha
Helix 18
AB9
A
321 325Right-handed 310
Helix 19
AC1
A
331 350Right-handed alpha
Helix 20
AC2
A
359 391Right-handed alpha
Helix 21
AC3
A
396 409Right-handed alpha
Helix 22
AC4
A
424 431Right-handed alpha
Helix 23
AC5
A
447 453Right-handed alpha
Helix 24
AC6
A
454 456Right-handed 310
Helix 25
AC7
A
464 477Right-handed alpha
Helix 26
AC8
A
480 485Right-handed alpha
Helix 27
AC9
A
488 503Right-handed alpha
Helix 28
AD1
A
507 516Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8TEJ.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
355 356anti-parallel
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