Analysis of interatomic Contacts of Structural Units in PDB entry:
8TEN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TEN entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 8TEN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 5GLN 409
A
 PRO 411LEU 516
B
 PHE 5PRO 606
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 8TEN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 20Right-handed alpha
Helix 2
AA2
A
21 32Right-handed alpha
Helix 3
AA3
A
33 35Right-handed 310
Helix 4
AA4
A
36 62Right-handed alpha
Helix 5
AA5
A
67 86Right-handed alpha
Helix 6
AA6
A
96 112Right-handed alpha
Helix 7
AA7
A
120 142Right-handed alpha
Helix 8
AA8
A
145 151Right-handed alpha
Helix 9
AA9
A
153 178Right-handed alpha
Helix 10
AB1
A
189 192Right-handed 310
Helix 11
AB2
A
193 219Right-handed alpha
Helix 12
AB3
A
220 224Right-handed 310
Helix 13
AB4
A
228 251Right-handed alpha
Helix 14
AB5
A
252 258Right-handed 310
Helix 15
AB6
A
282 287Right-handed alpha
Helix 16
AB7
A
292 297Right-handed alpha
Helix 17
AB8
A
297 319Right-handed alpha
Helix 18
AB9
A
321 325Right-handed 310
Helix 19
AC1
A
331 350Right-handed alpha
Helix 20
AC2
A
359 391Right-handed alpha
Helix 21
AC3
A
396 409Right-handed alpha
Helix 22
AC4
A
424 431Right-handed alpha
Helix 23
AC5
A
442 446Right-handed 310
Helix 24
AC6
A
447 453Right-handed alpha
Helix 25
AC7
A
454 456Right-handed 310
Helix 26
AC8
A
464 480Right-handed alpha
Helix 27
AC9
A
480 485Right-handed alpha
Helix 28
AD1
A
488 503Right-handed alpha
Helix 29
AD2
A
507 516Right-handed alpha
Helix 30
AD3
B
8 19Right-handed alpha
Helix 31
AD4
B
21 32Right-handed alpha
Helix 32
AD5
B
33 35Right-handed 310
Helix 33
AD6
B
36 62Right-handed alpha
Helix 34
AD7
B
67 86Right-handed alpha
Helix 35
AD8
B
96 113Right-handed alpha
Helix 36
AD9
B
120 142Right-handed alpha
Helix 37
AE1
B
143 151Right-handed 310
Helix 38
AE2
B
152 178Right-handed alpha
Helix 39
AE3
B
189 192Right-handed 310
Helix 40
AE4
B
193 219Right-handed alpha
Helix 41
AE5
B
220 224Right-handed 310
Helix 42
AE6
B
228 252Right-handed alpha
Helix 43
AE7
B
254 258Right-handed 310
Helix 44
AE8
B
282 287Right-handed alpha
Helix 45
AE9
B
290 297Right-handed alpha
Helix 46
AF1
B
297 320Right-handed alpha
Helix 47
AF2
B
321 325Right-handed 310
Helix 48
AF3
B
331 350Right-handed alpha
Helix 49
AF4
B
359 368Right-handed alpha
Helix 50
AF5
B
464 477Right-handed alpha
Helix 51
AF6
B
480 485Right-handed alpha
Helix 52
AF7
B
488 503Right-handed alpha
Helix 53
AF8
B
507 517Right-handed alpha
Helix 54
AF9
B
519 521Right-handed 310
Helix 55
AG1
B
522 529Right-handed alpha
Helix 56
AG2
B
533 538Right-handed alpha
Helix 57
AG3
B
539 562Right-handed alpha
Helix 58
AG4
B
565 568Right-handed 310
Helix 59
AG5
B
569 589Right-handed alpha
Helix 60
AG6
B
591 598Right-handed alpha
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There are 2 sheets in PDB entry 8TEN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
355 356anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 94first strand
Strand 2
B
355 356anti-parallel
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