Analysis of interatomic Contacts of Structural Units in PDB entry:
8TG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TG1 entry

There are 2 chains in PDB entry 8TG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 15LEU 382
B
 THR 15HIS 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8TG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 48Right-handed alpha
Helix 2
AA2
A
67 81Right-handed alpha
Helix 3
AA3
A
92 107Right-handed alpha
Helix 4
AA4
A
131 134Right-handed 310
Helix 5
AA5
A
135 146Right-handed alpha
Helix 6
AA6
A
158 176Right-handed alpha
Helix 7
AA7
A
192 203Right-handed alpha
Helix 8
AA8
A
214 226Right-handed alpha
Helix 9
AA9
A
241 249Right-handed alpha
Helix 10
AB1
A
249 254Right-handed alpha
Helix 11
AB2
A
268 283Right-handed alpha
Helix 12
AB3
A
289 310Right-handed alpha
Helix 13
AB4
A
313 322Right-handed alpha
Helix 14
AB5
A
376 380Right-handed 310
Helix 15
AB6
B
28 49Right-handed alpha
Helix 16
AB7
B
67 81Right-handed alpha
Helix 17
AB8
B
92 106Right-handed alpha
Helix 18
AB9
B
131 134Right-handed 310
Helix 19
AC1
B
135 146Right-handed alpha
Helix 20
AC2
B
158 176Right-handed alpha
Helix 21
AC3
B
192 203Right-handed alpha
Helix 22
AC4
B
214 226Right-handed alpha
Helix 23
AC5
B
241 249Right-handed alpha
Helix 24
AC6
B
250 253Right-handed 310
Helix 25
AC7
B
268 283Right-handed alpha
Helix 26
AC8
B
289 310Right-handed alpha
Helix 27
AC9
B
313 322Right-handed alpha
Helix 28
AD1
B
376 380Right-handed 310
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There are 6 sheets in PDB entry 8TG1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 63first strand
Strand 2
A
16 22parallel
Strand 3
A
87 89parallel
Strand 4
A
110 112parallel
Strand 5
A
125 127parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 185first strand
Strand 2
A
150 156parallel
Strand 3
A
206 210parallel
Strand 4
A
235 237parallel
Strand 5
A
257 260parallel
Strand 6
A
347 351anti-parallel
Strand 7
A
357 362anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 328first strand
Strand 2
A
331 335anti-parallel
Strand 3
A
342 343anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 63first strand
Strand 2
B
16 22parallel
Strand 3
B
87 89parallel
Strand 4
B
110 112parallel
Strand 5
B
125 127parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 185first strand
Strand 2
B
150 156parallel
Strand 3
B
206 210parallel
Strand 4
B
235 237parallel
Strand 5
B
257 260parallel
Strand 6
B
347 351anti-parallel
Strand 7
B
357 362anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 328first strand
Strand 2
B
331 335anti-parallel
Strand 3
B
342 343anti-parallel
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