Analysis of interatomic Contacts of Structural Units in PDB entry:
8TGG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TGG entry

There are 2 chains in PDB entry 8TGG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19GLU 486
B
 SER 19ALA 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 39 helices in PDB entry 8TGG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 41Right-handed alpha
Helix 2
AA2
A
44 51Right-handed alpha
Helix 3
AA3
A
135 144Right-handed alpha
Helix 4
AA4
A
144 154Right-handed alpha
Helix 5
AA5
A
160 165Right-handed alpha
Helix 6
AA6
A
166 187Right-handed alpha
Helix 7
AA7
A
191 219Right-handed alpha
Helix 8
AA8
A
221 254Right-handed alpha
Helix 9
AA9
A
256 278Right-handed alpha
Helix 10
AB1
A
292 297Right-handed alpha
Helix 11
AB2
A
299 320Right-handed alpha
Helix 12
AB3
A
322 331Right-handed alpha
Helix 13
AB4
A
337 342Right-handed alpha
Helix 14
AB5
A
342 364Right-handed alpha
Helix 15
AB6
A
364 383Right-handed alpha
Helix 16
AB7
A
384 386Right-handed 310
Helix 17
AB8
A
388 391Right-handed 310
Helix 18
AB9
A
392 421Right-handed alpha
Helix 19
AC1
A
426 455Right-handed alpha
Helix 20
AC2
A
456 470Right-handed alpha
Helix 21
AC3
A
471 480Right-handed 310
Helix 22
AC4
B
20 42Right-handed alpha
Helix 23
AC5
B
44 53Right-handed alpha
Helix 24
AC6
B
131 154Right-handed alpha
Helix 25
AC7
B
156 165Right-handed alpha
Helix 26
AC8
B
166 187Right-handed alpha
Helix 27
AC9
B
189 219Right-handed alpha
Helix 28
AD1
B
223 250Right-handed alpha
Helix 29
AD2
B
257 276Right-handed alpha
Helix 30
AD3
B
299 331Right-handed alpha
Helix 31
AD4
B
339 341Right-handed 310
Helix 32
AD5
B
342 360Right-handed alpha
Helix 33
AD6
B
364 383Right-handed alpha
Helix 34
AD7
B
384 386Right-handed 310
Helix 35
AD8
B
388 391Right-handed 310
Helix 36
AD9
B
392 422Right-handed alpha
Helix 37
AE1
B
427 455Right-handed alpha
Helix 38
AE2
B
456 472Right-handed alpha
Helix 39
AE3
B
473 479Right-handed 310
Back to top of page
There are no sheets in PDB entry 8TGG
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il