Analysis of interatomic Contacts of Structural Units in PDB entry:
8TGW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TGW entry

There are 6 chains in PDB entry 8TGW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 32	LYS 502
a	PHE 519	GLN 652
B	GLU 32	LYS 502
b	PHE 519	GLN 652
C	GLU 32	LYS 502
c	PHE 519	GLN 652

There are 34 helices in PDB entry 8TGW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	99	116	Right-handed alpha
Helix 2	AA2	A	335	351	Right-handed alpha
Helix 3	AA3	A	368	372	Right-handed alpha
Helix 4	AA4	A	475	481	Right-handed alpha
Helix 5	AA5	a	529	534	Right-handed alpha
Helix 6	AA6	a	536	542	Right-handed alpha
Helix 7	AA7	a	575	596	Right-handed alpha
Helix 8	AA8	a	618	626	Right-handed alpha
Helix 9	AA9	a	627	635	Right-handed alpha
Helix 10	AB1	a	638	651	Right-handed alpha
Helix 11	AB2	B	98	116	Right-handed alpha
Helix 12	AB3	B	122	126	Right-handed 310
Helix 13	AB4	B	335	353	Right-handed alpha
Helix 14	AB5	B	368	372	Right-handed alpha
Helix 15	AB6	B	425	429	Right-handed 310
Helix 16	AB7	B	475	481	Right-handed alpha
Helix 17	AB8	b	529	534	Right-handed alpha
Helix 18	AB9	b	536	542	Right-handed alpha
Helix 19	AC1	b	575	596	Right-handed alpha
Helix 20	AC2	b	618	626	Right-handed alpha
Helix 21	AC3	b	627	635	Right-handed alpha
Helix 22	AC4	b	638	652	Right-handed alpha
Helix 23	AC5	C	99	116	Right-handed alpha
Helix 24	AC6	C	177	179	Right-handed 310
Helix 25	AC7	C	335	353	Right-handed alpha
Helix 26	AC8	C	368	372	Right-handed alpha
Helix 27	AC9	C	425	429	Right-handed 310
Helix 28	AD1	C	475	480	Right-handed alpha
Helix 29	AD2	c	529	534	Right-handed alpha
Helix 30	AD3	c	537	543	Right-handed alpha
Helix 31	AD4	c	575	596	Right-handed alpha
Helix 32	AD5	c	618	626	Right-handed alpha
Helix 33	AD6	c	627	635	Right-handed alpha
Helix 34	AD7	c	638	652	Right-handed alpha

There are 31 sheets in PDB entry 8TGW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	494	499	first strand
Strand 2	A	35	40	anti-parallel
Strand 3	a	603	609	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	47	first strand
Strand 2	A	486	491	anti-parallel
Strand 3	A	223	228	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	84	86	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	94	first strand
Strand 2	A	236	239	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	131	first strand
Strand 2	A	155	162	anti-parallel
Strand 3	A	169	176	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	182	first strand
Strand 2	A	192	193	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	203	first strand
Strand 2	A	433	435	parallel
Strand 3	A	423	424	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	261	first strand
Strand 2	A	443	455	anti-parallel
Strand 3	A	284	298	anti-parallel
Strand 4	A	467	470	first strand
Strand 5	A	359	360	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	273	first strand
Strand 2	A	284	298	anti-parallel
Strand 3	A	443	455	anti-parallel
Strand 4	A	328	334	first strand
Strand 5	A	411	421	anti-parallel
Strand 6	A	380	384	anti-parallel
Strand 7	A	373	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	310	first strand
Strand 2	A	313	322	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	40	first strand
Strand 2	B	494	499	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	47	first strand
Strand 2	B	486	491	anti-parallel
Strand 3	B	223	228	anti-parallel
Strand 4	B	242	245	anti-parallel
Strand 5	B	83	86	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	55	first strand
Strand 2	B	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	93	first strand
Strand 2	B	237	238	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	155	162	first strand
Strand 2	B	169	176	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	182	first strand
Strand 2	B	192	193	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	203	first strand
Strand 2	B	434	435	parallel
Strand 3	B	423	424	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	261	first strand
Strand 2	B	443	455	anti-parallel
Strand 3	B	284	298	anti-parallel
Strand 4	B	467	470	first strand
Strand 5	B	359	360	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	273	first strand
Strand 2	B	284	298	anti-parallel
Strand 3	B	443	455	anti-parallel
Strand 4	B	328	334	first strand
Strand 5	B	411	421	anti-parallel
Strand 6	B	380	384	anti-parallel
Strand 7	B	373	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	302	310	first strand
Strand 2	B	313	321	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	494	499	first strand
Strand 2	C	35	40	anti-parallel
Strand 3	c	603	609	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	486	491	anti-parallel
Strand 3	C	223	228	anti-parallel
Strand 4	C	242	245	anti-parallel
Strand 5	C	83	84	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	55	first strand
Strand 2	C	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	94	first strand
Strand 2	C	236	239	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	155	162	first strand
Strand 2	C	169	176	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	182	first strand
Strand 2	C	192	193	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	261	first strand
Strand 2	C	443	454	anti-parallel
Strand 3	C	284	298	anti-parallel
Strand 4	C	271	274	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	261	first strand
Strand 2	C	443	454	anti-parallel
Strand 3	C	284	298	anti-parallel
Strand 4	C	328	334	anti-parallel
Strand 5	C	411	421	anti-parallel
Strand 6	C	380	384	anti-parallel
Strand 7	C	373	377	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	302	310	first strand
Strand 2	C	313	321	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	359	360	first strand
Strand 2	C	467	468	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	423	424	first strand
Strand 2	C	434	435	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TGW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TGW