Analysis of interatomic Contacts of Structural Units in PDB entry:
8THJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8THJ entry

There are 2 chains in PDB entry 8THJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 615
B
 MET 1ILE 615
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 73 helices in PDB entry 8THJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 5Right-handed 310
Helix 2
AA2
A
6 34Right-handed alpha
Helix 3
AA3
A
39 63Right-handed alpha
Helix 4
AA4
A
71 75Right-handed 310
Helix 5
AA5
A
76 109Right-handed alpha
Helix 6
AA6
A
121 126Right-handed alpha
Helix 7
AA7
A
126 149Right-handed alpha
Helix 8
AA8
A
155 173Right-handed alpha
Helix 9
AA9
A
174 180Right-handed 310
Helix 10
AB1
A
181 185Right-handed 310
Helix 11
AB2
A
188 190Right-handed 310
Helix 12
AB3
A
191 206Right-handed alpha
Helix 13
AB4
A
209 226Right-handed alpha
Helix 14
AB5
A
229 234Right-handed alpha
Helix 15
AB6
A
235 240Right-handed alpha
Helix 16
AB7
A
244 246Right-handed 310
Helix 17
AB8
A
247 260Right-handed alpha
Helix 18
AB9
A
261 277Right-handed alpha
Helix 19
AC1
A
282 296Right-handed alpha
Helix 20
AC2
A
300 320Right-handed alpha
Helix 21
AC3
A
322 333Right-handed alpha
Helix 22
AC4
A
334 337Right-handed 310
Helix 23
AC5
A
343 354Right-handed alpha
Helix 24
AC6
A
356 364Right-handed alpha
Helix 25
AC7
A
364 387Right-handed alpha
Helix 26
AC8
A
395 422Right-handed alpha
Helix 27
AC9
A
426 444Right-handed alpha
Helix 28
AD1
A
450 486Right-handed alpha
Helix 29
AD2
A
486 495Right-handed alpha
Helix 30
AD3
A
501 517Right-handed alpha
Helix 31
AD4
A
521 540Right-handed alpha
Helix 32
AD5
A
543 557Right-handed alpha
Helix 33
AD6
A
558 561Right-handed 310
Helix 34
AD7
A
565 576Right-handed alpha
Helix 35
AD8
A
578 587Right-handed alpha
Helix 36
AD9
A
589 603Right-handed alpha
Helix 37
AE1
A
603 615Right-handed alpha
Helix 38
AE2
B
1 5Right-handed 310
Helix 39
AE3
B
6 34Right-handed alpha
Helix 40
AE4
B
39 63Right-handed alpha
Helix 41
AE5
B
71 75Right-handed 310
Helix 42
AE6
B
76 109Right-handed alpha
Helix 43
AE7
B
121 126Right-handed alpha
Helix 44
AE8
B
126 149Right-handed alpha
Helix 45
AE9
B
155 173Right-handed alpha
Helix 46
AF1
B
174 180Right-handed 310
Helix 47
AF2
B
181 185Right-handed 310
Helix 48
AF3
B
188 190Right-handed 310
Helix 49
AF4
B
191 206Right-handed alpha
Helix 50
AF5
B
209 226Right-handed alpha
Helix 51
AF6
B
229 234Right-handed alpha
Helix 52
AF7
B
235 240Right-handed alpha
Helix 53
AF8
B
244 246Right-handed 310
Helix 54
AF9
B
247 260Right-handed alpha
Helix 55
AG1
B
261 277Right-handed alpha
Helix 56
AG2
B
282 296Right-handed alpha
Helix 57
AG3
B
300 320Right-handed alpha
Helix 58
AG4
B
322 333Right-handed alpha
Helix 59
AG5
B
335 340Right-handed alpha
Helix 60
AG6
B
343 354Right-handed alpha
Helix 61
AG7
B
356 387Right-handed alpha
Helix 62
AG8
B
395 422Right-handed alpha
Helix 63
AG9
B
426 445Right-handed alpha
Helix 64
AH1
B
450 486Right-handed alpha
Helix 65
AH2
B
486 495Right-handed alpha
Helix 66
AH3
B
501 518Right-handed alpha
Helix 67
AH4
B
521 540Right-handed alpha
Helix 68
AH5
B
543 557Right-handed alpha
Helix 69
AH6
B
558 561Right-handed 310
Helix 70
AH7
B
565 576Right-handed alpha
Helix 71
AH8
B
578 587Right-handed alpha
Helix 72
AH9
B
589 603Right-handed alpha
Helix 73
AI1
B
603 615Right-handed alpha
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There are no sheets in PDB entry 8THJ
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