Analysis of interatomic Contacts of Structural Units in PDB entry:
8TI8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TI8 entry

There are 4 chains in PDB entry 8TI8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 145GLU 379
C
 GLU 122GLY 380
D
 ASP 120GLU 379
B
 LEU 147GLY 380
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 8TI8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
147 156Right-handed alpha
Helix 2
AA2
A
159 169Right-handed alpha
Helix 3
AA3
A
171 197Right-handed alpha
Helix 4
AA4
A
203 213Right-handed alpha
Helix 5
AA5
A
214 223Right-handed alpha
Helix 6
AA6
A
246 253Right-handed alpha
Helix 7
AA7
A
286 318Right-handed alpha
Helix 8
AA8
A
342 354Right-handed alpha
Helix 9
AA9
A
363 379Right-handed alpha
Helix 10
AB1
C
123 130Right-handed alpha
Helix 11
AB2
C
132 141Right-handed alpha
Helix 12
AB3
C
145 157Right-handed alpha
Helix 13
AB4
C
159 169Right-handed alpha
Helix 14
AB5
C
171 198Right-handed alpha
Helix 15
AB6
C
203 213Right-handed alpha
Helix 16
AB7
C
214 223Right-handed alpha
Helix 17
AB8
C
246 253Right-handed alpha
Helix 18
AB9
C
286 317Right-handed alpha
Helix 19
AC1
C
336 340Right-handed 310
Helix 20
AC2
C
342 354Right-handed alpha
Helix 21
AC3
C
364 380Right-handed alpha
Helix 22
AC4
D
121 131Right-handed alpha
Helix 23
AC5
D
131 141Right-handed alpha
Helix 24
AC6
D
145 156Right-handed alpha
Helix 25
AC7
D
159 168Right-handed alpha
Helix 26
AC8
D
171 198Right-handed alpha
Helix 27
AC9
D
203 213Right-handed alpha
Helix 28
AD1
D
214 223Right-handed alpha
Helix 29
AD2
D
246 253Right-handed alpha
Helix 30
AD3
D
286 318Right-handed alpha
Helix 31
AD4
D
342 356Right-handed alpha
Helix 32
AD5
D
364 379Right-handed alpha
Helix 33
AD6
B
148 156Right-handed alpha
Helix 34
AD7
B
159 168Right-handed alpha
Helix 35
AD8
B
171 197Right-handed alpha
Helix 36
AD9
B
203 213Right-handed alpha
Helix 37
AE1
B
214 223Right-handed alpha
Helix 38
AE2
B
246 253Right-handed alpha
Helix 39
AE3
B
286 316Right-handed alpha
Helix 40
AE4
B
342 356Right-handed alpha
Helix 41
AE5
B
363 380Right-handed alpha
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There are 6 sheets in PDB entry 8TI8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
233 235anti-parallel
Strand 3
A
226 228anti-parallel
Strand 4
A
261 265parallel
Strand 5
A
329 333parallel
Strand 6
A
359 362parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
238 239first strand
Strand 2
C
233 235anti-parallel
Strand 3
C
227 228anti-parallel
Strand 4
C
261 264parallel
Strand 5
C
329 334parallel
Strand 6
C
359 363parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
238 239first strand
Strand 2
D
233 235anti-parallel
Strand 3
D
226 228anti-parallel
Strand 4
D
261 265parallel
Strand 5
D
329 334parallel
Strand 6
D
359 363parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
273 274first strand
Strand 2
D
284 285anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 240first strand
Strand 2
B
233 235anti-parallel
Strand 3
B
226 228anti-parallel
Strand 4
B
261 265parallel
Strand 5
B
329 333parallel
Strand 6
B
359 362parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 274first strand
Strand 2
B
284 285anti-parallel
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